RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 LINC00854A0A1B0GVQ3 168 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 NPIPB6E9PJ23 425 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 K7EPK0 472 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 CTDSP2O14595 271 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 SNRPCP09234 159 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 CT45A10P0DMU9 189 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 VAMP1P23763 118 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 MRPL23Q16540 153 aaKnown RBP7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 LYPD5Q6UWN5 251 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 PATE2Q6UY27 113 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 BPIFA4PQ86YQ2 179 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 ST6GAL2Q96JF0 529 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 PXMP4Q9Y6I8 212 aa7.99□□□□□ -1.13
GTF3C1-209ENST00000568569 KRTAP29-1A8MX34 341 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 SLC17A3O00476 420 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 SLC25A5P05141 298 aaKnown RBP7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 EVI2AP22794 236 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 SLAQ13239 276 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 NEGR1Q7Z3B1 354 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 LINC00305Q7Z4B0 112 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 NTN5Q8WTR8 489 aaPredicted RBP7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 DIRAS2Q96HU8 199 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 PRO0255Q9UI72 69 aa7.98□□□□□ -1.13
GTF3C1-209ENST00000568569 C7orf71A4D174 169 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 FNDC10F2Z333 226 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 SPINK4O60575 86 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 CRYBA4P53673 196 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 TCL1AP56279 114 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 SLC38A11Q08AI6 406 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 ANXA2RQ3ZCQ2 193 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 C4orf46Q504U0 113 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 ZNF546Q86UE3 836 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 EIF4E3Q8N5X7 224 aaKnown RBP7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 ZBTB8BQ8NAP8 495 aaPredicted RBP7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 NPVFQ9HCQ7 196 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 HHLA3Q9XRX5 114 aa7.97□□□□□ -1.13
GTF3C1-209ENST00000568569 H3BTX0 84 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 GOSR2O14653 212 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 PLA2G1BP04054 148 aaKnown RBP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 HOXB5P09067 269 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 IGLC2P0DOY2 106 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 FAUP35544 74 aaKnown RBP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 RRAS2P62070 204 aaPredicted RBP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 POLR2GP62487 172 aaKnown RBP eCLIP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 WFDC10BQ8IUB3 73 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 C10orf126Q8N4M7 172 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 SAT2Q96F10 170 aaPredicted RBP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 VGLL1Q99990 258 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 PSENENQ9NZ42 101 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 MGAT4CQ9UBM8 478 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 RSL24D1Q9UHA3 163 aaKnown RBP7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.14
GTF3C1-209ENST00000568569 PSCAO43653 123 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 COX7A2P2O60397 106 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 PRAF2O60831 178 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 SFT2D2O95562 160 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 ID3Q02535 119 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 IBA57Q5T440 356 aaKnown RBP7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 OR10P1Q8NGE3 313 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 C8orf49Q96NF6 230 aa7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 CCDC59Q9P031 241 aaKnown RBP7.95□□□□□ -1.14
GTF3C1-209ENST00000568569 KLLNB2CW77 178 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 H3BQ15 152 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 SSSCA1O60232 199 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 CCNKO75909 580 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 CRYGDP07320 174 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 METTL15P1P0C7V9 234 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 SRIP30626 198 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 BTN1A1Q13410 526 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 PPP1R1AQ13522 171 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 OPCMLQ14982 345 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 GUK1Q16774 197 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 MORN5Q5VZ52 161 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 DEFB104AQ8WTQ1 72 aa7.94□□□□□ -1.14
GTF3C1-209ENST00000568569 LRCOL1A6NCL2 159 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 E5RGE8 158 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 K7EQD1 137 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 AGPAT2O15120 278 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 MPDU1O75352 247 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 C1QBP02746 253 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 AP3S2P59780 193 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 CD300CQ08708 224 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 FHL2Q14192 279 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 C10orf113Q5VZT2 155 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 TMEM14EPQ6UXP3 125 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 PCNPQ8WW12 178 aaKnown RBP7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 TMEM37Q8WXS4 190 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 MRPL53Q96EL3 112 aaKnown RBP7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 SMIM8Q96KF7 97 aa7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 SLC25A21Q9BQT8 299 aaPredicted RBP7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 MRPL32Q9BYC8 188 aaKnown RBP7.93□□□□□ -1.14
GTF3C1-209ENST00000568569 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms