RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 AP2S1P53680 142 aaPredicted RBP4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 FXYD7P58549 80 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 LYZP61626 148 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SNRPD3P62318 126 aaKnown RBP4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SURF2Q15527 256 aaPredicted RBP4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 NMSQ5H8A3 153 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ETFRF1Q6IPR1 90 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SIGLEC15Q6ZMC9 328 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 LYZL2Q7Z4W2 148 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 GPR141Q7Z602 305 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 CENPSQ8N2Z9 138 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PRRT1Q99946 306 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PBDC1Q9BVG4 233 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SCRT1Q9BWW7 348 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RBKSQ9H477 322 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 NRN1Q9NPD7 142 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 MCUBQ9NWR8 336 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PRO0461Q9UI25 63 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 KCNIP3Q9Y2W7 256 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 TMEM56-RWDD3S4R434 201 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 IGHV3OR16-12A0A075B7B8 117 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 DEFB131BA0A096LNP1 70 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ANKRD20A5PA0PJZ0 165 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZFP92A6NM28 416 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 CTDSPLO15194 276 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 GSTZ1O43708 216 aaPredicted RBP4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 CCR6P51684 374 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 EMP1P54849 157 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 NUTF2P61970 127 aaKnown RBP4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SUPT4H1P63272 117 aaKnown RBP4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF90Q03938 601 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 OR2F1Q13607 317 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SMCO1Q147U7 214 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 C12orf74Q32Q52 190 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 GDF5OSQ5U4N7 250 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 Q6ZVQ6 151 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 LGI3Q8N145 548 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 DTD1Q8TEA8 209 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 IL22RA2Q969J5 263 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 LINC00052Q96N35 136 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 MRPS26Q9BYN8 205 aaKnown RBP4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SCP2D1Q9UJQ7 156 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 LYSTQ99698 3801 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 IGKV1D-37A0A075B6S9 117 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 A0A0B4J2A0 478 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 A4D1N5 150 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PRAF2O60831 178 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 IAPPP10997 89 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 GAMTQ14353 236 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 COX8CQ7Z4L0 72 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 OR4B1Q8NGF8 309 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 OR1S1Q8NH92 325 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 DYNC2LI1Q8TCX1 351 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SLC35E1Q96K37 410 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SCGB3A2Q96PL1 93 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RNF126Q9BV68 326 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 CCDC59Q9P031 241 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SHPKQ9UHJ6 478 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PAIP2BQ9ULR5 123 aaKnown RBP4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 U3KQ87 197 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 FABP12A6NFH5 140 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 E5RGE8 158 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 F6UB75 175 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 M0R2N4 97 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 GPX4P36969 197 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ID1P41134 155 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 TMED4Q7Z7H5 227 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 COQ8AQ8NI60 647 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PPP1R14BQ96C90 147 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SLC35B3Q9H1N7 401 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SAV1Q9H4B6 383 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RABL2AQ9UBK7 228 aaPredicted RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 CACFD1Q9UGQ2 172 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RSL24D1Q9UHA3 163 aaKnown RBP4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RABL2BQ9UNT1 228 aa4.79□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF705FA8MVS1 300 aaPredicted RBP4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SNRPGP15A8MWD9 76 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PITX3O75364 302 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF705DP0CH99 300 aaPredicted RBP4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF705BP0CI00 300 aaPredicted RBP4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SPART-AS1P0CW21 52 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ANXA3P12429 323 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 HTN3P15516 51 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 PSMB3P49720 205 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 TMBIM6P55061 237 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 OR8G2PQ6IF36 304 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 ZNF705AQ6ZN79 300 aaPredicted RBP4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 FOXI2Q6ZQN5 318 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 OR8I2Q8N0Y5 310 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 MCFD2Q8NI22 146 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 RAB2BQ8WUD1 216 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 TRGV9Q99603 122 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 NDUFAF3Q9BU61 184 aa4.78□□□□□ -1.64
DNAAF4-CCPG1-202ENST00000568310 SLIRPQ9GZT3 109 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms