RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 EEF1E1-BLOC1S5C9J1V9 151 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 APOC4-APOC2K7ER74 178 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 EEF1E1O43324 174 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 EEDO75530 441 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 PROSCO94903 275 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SFT2D2O95562 160 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 PFN1P07737 140 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 LGALS1P09382 135 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 TACSTD2P09758 323 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 IGLC2P0DOY2 106 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 IGLC3P0DOY3 106 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 BCL2P10415 239 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 PIPP12273 146 aaPredicted RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 ADCYAP1P18509 176 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CSRP1P21291 193 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 POLR2IP36954 125 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CXCL12P48061 93 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 UBE2AP49459 152 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SSR4P51571 173 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 RBM11P57052 281 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 TMEM258P61165 79 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 RPS24P62847 133 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CATR1Q13166 79 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 PAFAH1B3Q15102 231 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 LY6EQ16553 131 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CEACAM16Q2WEN9 425 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SPATA45Q537H7 98 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CLLU1OSQ5K130 101 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 GLYATL3Q5SZD4 288 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 Q5W150 140 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 EPGNQ6UW88 154 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 LCN15Q6UWW0 184 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 AMTNQ6UX39 209 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CLEC20AQ6ZU45 233 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 C1orf174Q8IYL3 243 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 ATOH7Q8N100 152 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 C10orf126Q8N4M7 172 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 ZNF709Q8N972 641 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 OR8B12Q8NGG6 310 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 OR5D14Q8NGL3 314 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 OR10D3Q8NH80 312 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 CMTM2Q8TAZ6 248 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 ZNF502Q8TBZ5 544 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 RTN4IP1Q8WWV3 396 aaPredicted RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 MUCL1Q96DR8 90 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 TVP23CQ96ET8 276 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 S100A16Q96FQ6 103 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 ZNF488Q96MN9 340 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SCGB3A2Q96PL1 93 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 OR2A5Q96R48 311 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 HSD17B10Q99714 261 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SPIN2AQ99865 258 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 FOXC2Q99958 501 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SPIN2BQ9BPZ2 258 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 AGMATQ9BSE5 352 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 RTBDNQ9BSG5 229 aaPredicted RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 COMMD5Q9GZQ3 224 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 EIF5A2Q9GZV4 153 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 RPP21Q9H633 154 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 VSIRQ9H7M9 311 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 NAA60Q9H7X0 242 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 LSM7Q9UK45 103 aaKnown RBP2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 MPC1Q9Y5U8 109 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 SCN1AP35498 2009 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 UNC13CQ8NB66 2214 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 FBN2P35556 2912 aa2.11□□□□□ -2.07
HERPUD1-212ENST00000567944 COL5A1P20908 1838 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 LRBAP50851 2863 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 ZFHX3Q15911 3703 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 TRAV9-1A0A075B6T8 112 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 TRGV10A0A0A0MS01 117 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 TRAV19A0A0A6YYK7 116 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 IGHV3-66A0A0C4DH42 116 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 ARRDC5A6NEK1 342 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 TLCD2A6NGC4 264 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 H0YJW9 148 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 CCL21O00585 134 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 UQCRQO14949 82 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 GSTZ1O43708 216 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 PITX3O75364 302 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 HYPMO75409 117 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 CLDN11O75508 207 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 UBL3O95164 117 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 KRASP01116 189 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 CD8AP01732 235 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 MT-ND6P03923 174 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 TRGC2P03986 189 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 PTHLHP12272 177 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 RPL7P18124 248 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 PRTN3P24158 256 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 REG1BP48304 166 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 HINT1P49773 126 aaPredicted RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 RND2P52198 227 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 FOXA1P55317 472 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 PPP1CBP62140 327 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 RPS23P62266 143 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 RPL18AQ02543 176 aaKnown RBP2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
HERPUD1-212ENST00000567944 ELOBQ15370 118 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms