RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
COMMD4-221ENST00000567935 SRD5A3Q9H8P0 318 aa11.22□□□□□ -0.61
COMMD4-221ENST00000567935 AURKAIP1Q9NWT8 199 aaPredicted RBP11.22□□□□□ -0.61
COMMD4-221ENST00000567935 PEF1Q9UBV8 284 aaKnown RBP11.22□□□□□ -0.61
COMMD4-221ENST00000567935 ZFP30Q9Y2G7 519 aa11.22□□□□□ -0.61
COMMD4-221ENST00000567935 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 H3BTX0 84 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
COMMD4-221ENST00000567935 FAM3BP58499 235 aaPredicted RBP11.21□□□□□ -0.61
COMMD4-221ENST00000567935 RPL15P61313 204 aaKnown RBP11.21□□□□□ -0.61
COMMD4-221ENST00000567935 IBA57Q5T440 356 aaKnown RBP11.21□□□□□ -0.61
COMMD4-221ENST00000567935 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.61
COMMD4-221ENST00000567935 MLST8Q9BVC4 326 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 ZNF492Q9P255 531 aa11.21□□□□□ -0.61
COMMD4-221ENST00000567935 BIRC6Q9NR09 4857 aa11.21□□□□□ -0.62
COMMD4-221ENST00000567935 TRAV34A0A0B4J273 112 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 IGHV3-35A0A0C4DH35 117 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 ZNF785A8K8V0 405 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 K7EMT4 169 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 SNRPCP09234 159 aaKnown RBP11.2□□□□□ -0.62
COMMD4-221ENST00000567935 BMI1P35226 326 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 FAM106AQ4KMX7 169 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 Q86TA4 180 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 LINC00479Q96M42 142 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 V9GYV3 84 aa11.2□□□□□ -0.62
COMMD4-221ENST00000567935 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 SLC17A3O00476 420 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 PSG3Q16557 428 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 TMEM95Q3KNT9 176 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 COX19Q49B96 90 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 C16orf54Q6UWD8 224 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 ZNF331Q9NQX6 463 aaPredicted RBP11.19□□□□□ -0.62
COMMD4-221ENST00000567935 SMAD5-AS1Q9Y6J3 95 aa11.19□□□□□ -0.62
COMMD4-221ENST00000567935 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 OR5I1Q13606 314 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 CT83Q5H943 113 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 SAMD13Q5VXD3 122 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 UBE2E2Q96LR5 201 aa11.18□□□□□ -0.62
COMMD4-221ENST00000567935 GATCO43716 136 aaKnown RBP11.17□□□□□ -0.62
COMMD4-221ENST00000567935 IGLV2-11P01706 119 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 TRBV12-3P01733 135 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 S100A6P06703 90 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
COMMD4-221ENST00000567935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 OR4B1Q8NGF8 309 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
COMMD4-221ENST00000567935 PSG8Q9UQ74 426 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 UFC1Q9Y3C8 167 aa11.17□□□□□ -0.62
COMMD4-221ENST00000567935 IGHV3OR16-8A0A075B7F1 116 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 ZNF705GA8MUZ8 300 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-221ENST00000567935 SAPCD1Q5SSQ6 148 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 COX8CQ7Z4L0 72 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
COMMD4-221ENST00000567935 RNASE7Q9H1E1 156 aaKnown RBP11.16□□□□□ -0.62
COMMD4-221ENST00000567935 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
COMMD4-221ENST00000567935 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 SMIM27A0A1W2PRY6 76 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 DNAJC9-AS1A6NH13 148 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 M0R3E3 92 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 PRNTQ86SH4 94 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 NUDT10Q8NFP7 164 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 NUDT11Q96G61 164 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.62
COMMD4-221ENST00000567935 C19orf71A6NCJ1 209 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 A8MWL6 223 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 CHEK1O14757 476 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 P01737 135 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 TRGC2P03986 189 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 CT45A10P0DMU9 189 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 RASL11AQ6T310 242 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 REC114Q7Z4M0 266 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 ZFP82Q8N141 532 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 NHLRC2Q8NBF2 726 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 JMJD8Q96S16 334 aa11.14□□□□□ -0.63
COMMD4-221ENST00000567935 RPP21Q9H633 154 aaKnown RBP11.14□□□□□ -0.63
COMMD4-221ENST00000567935 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
COMMD4-221ENST00000567935 NPIPB6E9PJ23 425 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 LGALS9O00182 355 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
COMMD4-221ENST00000567935 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
COMMD4-221ENST00000567935 MT-ND6P03923 174 aa11.13□□□□□ -0.63
COMMD4-221ENST00000567935 RPLP1P05386 114 aaKnown RBP11.13□□□□□ -0.63
COMMD4-221ENST00000567935 PRR27Q6MZM9 219 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms