RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
CAPN3-216ENST00000567071 FAM122CQ6P4D5 195 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 TEX261Q6UWH6 196 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 TOMM20LQ6UXN7 152 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 ZNF680Q8NEM1 530 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 OR1B1Q8NGR6 318 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 Q8WTZ3 238 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 PCNPQ8WW12 178 aaKnown RBP6.9□□□□□ -1.3
CAPN3-216ENST00000567071 ATP6V0BQ99437 205 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 C20orf24Q9BUV8 137 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 SLC25A22Q9H936 323 aa6.9□□□□□ -1.3
CAPN3-216ENST00000567071 IGHV3-49A0A0A0MS15 119 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 HYPMO75409 117 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 IFNA7P01567 189 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 FHITP49789 147 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 SERF2P84101 59 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 ZNF124Q15973 351 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 ACOT6Q3I5F7 207 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-216ENST00000567071 SPATA31B1PQ5VZV4 182 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 CDPF1Q6NVV7 123 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 UNQ9165/PRO28630Q6UXU0 137 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 Q6ZRG5 221 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 TMEM190Q8WZ59 177 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 PHYHIPLQ96FC7 376 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 UHRF2Q96PU4 802 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 RPRMQ9NS64 109 aa6.89□□□□□ -1.31
CAPN3-216ENST00000567071 ZNF705EA8MWA4 302 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-216ENST00000567071 NDUFA4O00483 81 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 HMGB3O15347 200 aaKnown RBP6.88□□□□□ -1.31
CAPN3-216ENST00000567071 M6PRP20645 277 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 SULT1A2P50226 295 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 FAM78BQ5VT40 261 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 MORN5Q5VZ52 161 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 C10orf113Q5VZT2 155 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-216ENST00000567071 PATE2Q6UY27 113 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 SSX7Q7RTT5 188 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 OR10G4Q8NGN3 311 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 OR10G9Q8NGN4 311 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 OR10G7Q8NGN6 311 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 OR1L4Q8NGR5 311 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 DEFB104AQ8WTQ1 72 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 TMEM37Q8WXS4 190 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 PFDN5Q99471 154 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 RABAC1Q9UI14 185 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 HIGD1AQ9Y241 93 aa6.88□□□□□ -1.31
CAPN3-216ENST00000567071 IGHV3OR16-13A0A075B7E8 117 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 IGHV3-74A0A0B4J1X5 117 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 IGHV3-66A0A0C4DH42 116 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 A0A1B0GV50 99 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 UMAD1C9J7I0 102 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 MBP02144 154 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
CAPN3-216ENST00000567071 PRB4P10163 310 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-216ENST00000567071 CDC34P49427 236 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-216ENST00000567071 PLP1P60201 277 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 RHOBP62745 196 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 ZNF726P1Q15940 193 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 TTC32Q5I0X7 151 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 PXDC1Q5TGL8 231 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 LEMD1Q68G75 181 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 LINC00305Q7Z4B0 112 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 STHQ8IWL8 128 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
CAPN3-216ENST00000567071 DNAJC4Q9NNZ3 241 aa6.87□□□□□ -1.31
CAPN3-216ENST00000567071 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 CTXND1A0A1B0GTU2 59 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 A0A1W2PPV4 95 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 HTN3P15516 51 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 TFPI2P48307 235 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 RAB5CP51148 216 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 FGF8P55075 233 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-216ENST00000567071 LCN15Q6UWW0 184 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 RNF141Q8WVD5 230 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 RAB24Q969Q5 203 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 METTL26Q96S19 204 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 SLC25A39Q9BZJ4 359 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-216ENST00000567071 ACTR3CQ9C0K3 210 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-216ENST00000567071 MAP1LC3BQ9GZQ8 125 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 DAZ1Q9NQZ3 744 aaKnown RBP6.86□□□□□ -1.31
CAPN3-216ENST00000567071 FUT9Q9Y231 359 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 X6R8D5 127 aa6.86□□□□□ -1.31
CAPN3-216ENST00000567071 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 H3BRN7 92 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
CAPN3-216ENST00000567071 DPPA3Q6W0C5 159 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 IQCF2Q8IXL9 164 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 RNF2Q99496 336 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 SHANK2-AS3Q9BTD1 123 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 SLC25A2Q9BXI2 301 aa6.85□□□□□ -1.31
CAPN3-216ENST00000567071 MRPL32Q9BYC8 188 aaKnown RBP6.85□□□□□ -1.31
CAPN3-216ENST00000567071 IGHV7-4-1A0A0J9YVY3 117 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms