RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 WI2-2373I1.2A0A1W2PRP0 233 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 A8MWP6 167 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 TOMM40O96008 361 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 MT-ND6P03923 174 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 CSN3P07498 182 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 RD3LP0DJH9 198 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 C8orf88P0DMB2 117 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 ESDP10768 282 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 TOMM20LQ6UXN7 152 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 OR9G4Q8NGQ1 327 aa9.6□□□□□ -0.87
SF3B3-206ENST00000565990 IGHV3-35A0A0C4DH35 117 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 WIPF1O43516 503 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 LINC00869P0C866 280 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 PSG1P11464 419 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 ZNF90Q03938 601 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 IQCJQ1A5X6 159 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 FAM78BQ5VT40 261 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 ADAMTSL5Q6ZMM2 481 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 MRPL52Q86TS9 123 aaKnown RBP9.59□□□□□ -0.87
SF3B3-206ENST00000565990 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 TRAPPC1Q9Y5R8 145 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 CMYA5Q8N3K9 4069 aa9.59□□□□□ -0.87
SF3B3-206ENST00000565990 CD33P20138 364 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 CBLN1P23435 193 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 TAS2R60P59551 318 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 GBGT1Q8N5D6 347 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 OR1L4Q8NGR5 311 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 MCRIP2Q9BUT9 160 aaKnown RBP9.58□□□□□ -0.88
SF3B3-206ENST00000565990 ELOVL1Q9BW60 279 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 MRPL27Q9P0M9 148 aaKnown RBP9.58□□□□□ -0.88
SF3B3-206ENST00000565990 UFC1Q9Y3C8 167 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 U3KQE9 123 aa9.58□□□□□ -0.88
SF3B3-206ENST00000565990 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 GZMBP10144 247 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 DDTP30046 118 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 INSL3P51460 131 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 PLP1P60201 277 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 UBE2G2P60604 165 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 TM4SF20Q53R12 229 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 GNB1LQ9BYB4 327 aa9.57□□□□□ -0.88
SF3B3-206ENST00000565990 DAZ1Q9NQZ3 744 aaKnown RBP9.57□□□□□ -0.88
SF3B3-206ENST00000565990 ISLRO14498 428 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 CRYBB3P26998 211 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 RANP62826 216 aaKnown RBP9.56□□□□□ -0.88
SF3B3-206ENST00000565990 Q0VG73 95 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 STXBP6Q8NFX7 210 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 SMPXQ9UHP9 88 aa9.56□□□□□ -0.88
SF3B3-206ENST00000565990 YTHDF2Q9Y5A9 579 aaKnown RBP9.56□□□□□ -0.88
SF3B3-206ENST00000565990 TRBV20OR9-2A0A075B6H5 130 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 HELTA6NFD8 242 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 IGLL1P15814 213 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 EDN2P20800 178 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 GATA2P23769 480 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-206ENST00000565990 SSTP61278 116 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
SF3B3-206ENST00000565990 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 TMEM37Q8WXS4 190 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 RNF125Q96EQ8 232 aa9.55□□□□□ -0.88
SF3B3-206ENST00000565990 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 IGHV7-4-1A0A0J9YVY3 117 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 CHEK1O14757 476 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 IGLV1-51P01701 117 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 IL4P05112 153 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 GNG4P50150 75 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 DEFB114Q30KQ6 69 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 PDZD11Q5EBL8 140 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 PATE2Q6UY27 113 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 FAM231DQ6ZW35 169 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 LINC00469Q8N7U9 141 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 DERL1Q9BUN8 251 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 SEPSECSQ9HD40 501 aaKnown RBP9.54□□□□□ -0.88
SF3B3-206ENST00000565990 NOTCH3Q9UM47 2321 aa9.54□□□□□ -0.88
SF3B3-206ENST00000565990 ZNF207O43670 478 aaKnown RBP9.53□□□□□ -0.88
SF3B3-206ENST00000565990 BUB3O43684 328 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 APOHP02749 345 aaPredicted RBP9.53□□□□□ -0.88
SF3B3-206ENST00000565990 RAB4BP61018 213 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 OXLD1Q5BKU9 147 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 C14orf144Q96I85 54 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 METTL26Q96S19 204 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 NDUFAF3Q9BU61 184 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 DNAJC4Q9NNZ3 241 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 RABAC1Q9UI14 185 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 V9GYV3 84 aa9.53□□□□□ -0.88
SF3B3-206ENST00000565990 HYPMO75409 117 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 HLA-DQA1P01909 254 aa9.52□□□□□ -0.89
SF3B3-206ENST00000565990 EGFEM1PQ0D2K5 195 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms