RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PDE6DO43924 150 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 SRP19P09132 144 aaKnown RBP8.33□□□□□ -1.08
SF3B3-205ENST00000564899 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 TFPI2P48307 235 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 CEBPGP53567 150 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 PAFAH1B2P68402 229 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 CD300EQ496F6 205 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-205ENST00000564899 SAMD13Q5VXD3 122 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 TMEM61Q8N0U2 210 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 C5orf17Q8NAS9 161 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 CMTM2Q8TAZ6 248 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 TCEAL7Q9BRU2 100 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 SLC35B3Q9H1N7 401 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 RPH3ALQ9UNE2 315 aa8.33□□□□□ -1.08
SF3B3-205ENST00000564899 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 M0R3E3 92 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 ISLRO14498 428 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 TSPAN4O14817 238 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
SF3B3-205ENST00000564899 SFTA3P0C7M3 94 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 CD33P20138 364 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 ID1P41134 155 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 GNG5P63218 68 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 OXLD1Q5BKU9 147 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 RNF182Q8N6D2 247 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 CYB561D1Q8N8Q1 229 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 DCANP1Q8TF63 244 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 CLEC5AQ9NY25 188 aa8.32□□□□□ -1.08
SF3B3-205ENST00000564899 TRAV2A0A0B4J234 112 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 TMEM218A2RU14 115 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 K7EQG2 157 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 PEX7O00628 323 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 IGLV1-51P01701 117 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 AKR1C3P42330 323 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 CSN1S1P47710 185 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 C9orf66Q5T8R8 295 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 OR2K2Q8NGT1 345 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 HIST1H2BAQ96A08 127 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 C11orf52Q96A22 123 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 MRPL53Q96EL3 112 aaKnown RBP8.31□□□□□ -1.08
SF3B3-205ENST00000564899 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-205ENST00000564899 ATG101Q9BSB4 218 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 AURKAIP1Q9NWT8 199 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-205ENST00000564899 EPDR1Q9UM22 224 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
SF3B3-205ENST00000564899 IZUMO1RA6ND01 250 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 TCRAP04437 139 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 INSL3P51460 131 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 PSG3Q16557 428 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 GUCA2BQ16661 112 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 LCN12Q6JVE5 192 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 FAM24BQ8N5W8 94 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 ZNF738Q8NE65 137 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 RPUSD4Q96CM3 377 aaKnown RBP8.3□□□□□ -1.08
SF3B3-205ENST00000564899 C20orf173Q96LM9 149 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 LINC00052Q96N35 136 aa8.3□□□□□ -1.08
SF3B3-205ENST00000564899 MCRIP2Q9BUT9 160 aaKnown RBP8.3□□□□□ -1.08
SF3B3-205ENST00000564899 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 ZNF705FA8MVS1 300 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-205ENST00000564899 DIRC3C9JPN6 131 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 PRB4P10163 310 aaPredicted RBP8.29□□□□□ -1.08
SF3B3-205ENST00000564899 CNN1P51911 297 aaKnown RBP8.29□□□□□ -1.08
SF3B3-205ENST00000564899 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
SF3B3-205ENST00000564899 ZNF674Q2M3X9 581 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 GOLT1AQ6ZVE7 132 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 ARL6IP6Q8N6S5 226 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 WFDC9Q8NEX5 89 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 C2CD4CQ8TF44 421 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 PARLQ9H300 379 aa8.29□□□□□ -1.08
SF3B3-205ENST00000564899 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-205ENST00000564899 SERTM2A0A1B0GWG4 89 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 PRAC2D3DTV9 90 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 F8W036 122 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 K7EQM0 130 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 IGKV2D-40P01614 121 aaPredicted RBP8.28□□□□□ -1.08
SF3B3-205ENST00000564899 ADCYAP1P18509 176 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 PSMG4Q5JS54 123 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 SMIM7Q9BQ49 75 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 DERL1Q9BUN8 251 aa8.28□□□□□ -1.08
SF3B3-205ENST00000564899 DNAH1Q9P2D7 4330 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 KRBOX1C9JBD0 128 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 IGLL1P15814 213 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 RPL35P42766 123 aaKnown RBP8.27□□□□□ -1.09
SF3B3-205ENST00000564899 UBE2G1P62253 170 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 LINC00479Q96M42 142 aa8.27□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF256Q9Y2P7 627 aaPredicted RBP8.27□□□□□ -1.09
SF3B3-205ENST00000564899 STAB2Q8WWQ8 2551 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 TRAV8-1A0A0A6YYK1 113 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 S100A9P06702 114 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms