RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 ATP5G1P05496 136 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 LINC00869P0C866 280 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 RPL7P18124 248 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 ATP5G3P48201 142 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 RHOBP62745 196 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 PSG3Q16557 428 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 LRRC37A5PQ49AS3 106 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 PATE2Q6UY27 113 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 OR2T35Q8NGX2 323 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 OR5AC2Q9NZP5 309 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 CDK2AP2O75956 126 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 OR5G3P0C626 314 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 HTN1P15515 57 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 S100A7P31151 101 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 SULT1A1P50225 295 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 CAV2P51636 162 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 TAS2R60P59551 318 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 BAXQ07812 192 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 KIR3DS1Q14943 382 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 STX12Q86Y82 276 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 TMEM256Q8N2U0 113 aa11.71□□□□□ -0.53
HDGFL3-203ENST00000563404 S100A11P31949 105 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 CCL18P55774 89 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 DLK1P80370 383 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 ATP6V1FQ16864 119 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 RNASE8Q8TDE3 154 aaKnown RBP11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 C16orf74Q96GX8 76 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 MBD2Q9UBB5 411 aa11.7□□□□□ -0.54
HDGFL3-203ENST00000563404 FAM24AA6NFZ4 105 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 SNRPCP09234 159 aaKnown RBP11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 METTL15P1P0C7V9 234 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 HBG1P69891 147 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 HBG2P69892 147 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 SSX7Q7RTT5 188 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 TCTE3Q8IZS6 198 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 RPUSD4Q96CM3 377 aaKnown RBP11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 KRTAP1-5Q9BYS1 174 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 ARL6Q9H0F7 186 aa11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 NOP10Q9NPE3 64 aaKnown RBP11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 TIMM8BQ9Y5J9 83 aaPredicted RBP11.69□□□□□ -0.54
HDGFL3-203ENST00000563404 A0A1B0GVG6 124 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 CDKN1BP46527 198 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 SELENOTP62341 195 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 SLC38A11Q08AI6 406 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 Q5BKY6 102 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 MAPKAPK5-AS1Q8N8E1 139 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 AQP10Q96PS8 301 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 PARD6GQ9BYG4 376 aaPredicted RBP11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 NPVFQ9HCQ7 196 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 PPP1R14DQ9NXH3 145 aa11.68□□□□□ -0.54
HDGFL3-203ENST00000563404 IGSF23A1L1A6 192 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 HMSDA8MTL9 139 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 PRAC2D3DTV9 90 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 G3V3Q6 166 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 ZNF546Q86UE3 836 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 LINC00612Q8N6U2 182 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 LRRC20Q8TCA0 184 aa11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 TMEM263Q8WUH6 116 aaKnown RBP11.67□□□□□ -0.54
HDGFL3-203ENST00000563404 CST7O76096 145 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 ARL16Q0P5N6 197 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 CLINT1Q14677 625 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 Q9H8V8 135 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 ZNF331Q9NQX6 463 aaPredicted RBP11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
HDGFL3-203ENST00000563404 hCG_2014768A0A024R1R8 64 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 H3BTX0 84 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 H7BYZ3 331 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 SLC17A3O00476 420 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 CXCL2P19875 107 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 HOXA5P20719 270 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 NHLH2Q02577 135 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 OR5I1Q13606 314 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 MORN5Q5VZ52 161 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 SPATA12Q7Z6I5 190 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 HSPB11Q9Y547 144 aa11.65□□□□□ -0.54
HDGFL3-203ENST00000563404 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 A0A0J9YY99 117 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 GFI1BQ5VTD9 330 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 LCN15Q6UWW0 184 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 LINC00305Q7Z4B0 112 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
HDGFL3-203ENST00000563404 MPDU1O75352 247 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 ESRGQ1W209 222 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 OR5C1Q8NGR4 320 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 TMEM37Q8WXS4 190 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 GNPNAT1Q96EK6 184 aaPredicted RBP11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 SLC50A1Q9BRV3 221 aa11.63□□□□□ -0.55
HDGFL3-203ENST00000563404 FXYD6-FXYD2A0A087WZ82 144 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms