RNA–Protein interactions for RNA: ENST00000563396.1

SMPD3-204, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-204ENST00000563396 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
SMPD3-204ENST00000563396 ODF3Q96PU9 254 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 C20orf144Q9BQM9 153 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 SLC25A31Q9H0C2 315 aa9.99□□□□□ -0.81
SMPD3-204ENST00000563396 TRAV5A0A0B4J249 113 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
SMPD3-204ENST00000563396 DEFA1P59665 94 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 DEFA3P59666 94 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 RHOBP62745 196 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 PDE6HQ13956 83 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 BATF3Q9NR55 127 aa9.98□□□□□ -0.81
SMPD3-204ENST00000563396 TRBV19A0A075B6N1 114 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 ZNF705GA8MUZ8 300 aaPredicted RBP9.97□□□□□ -0.81
SMPD3-204ENST00000563396 PRAC2D3DTV9 90 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 NPIPB6E9PJ23 425 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 H3BTX0 84 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 RLN2P04090 185 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 P0DMU3 169 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 TAS2R60P59551 318 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 NHLH2Q02577 135 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 LRRC37A5PQ49AS3 106 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 PPP1R1CQ8WVI7 109 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 ZNF586Q9NXT0 402 aa9.97□□□□□ -0.81
SMPD3-204ENST00000563396 DAD1P61803 113 aa9.96□□□□□ -0.82
SMPD3-204ENST00000563396 GCSAMLQ5JQS6 135 aa9.96□□□□□ -0.82
SMPD3-204ENST00000563396 OR10J6PQ8NGY7 276 aa9.96□□□□□ -0.82
SMPD3-204ENST00000563396 THAP6Q8TBB0 222 aa9.96□□□□□ -0.82
SMPD3-204ENST00000563396 RNASE8Q8TDE3 154 aaKnown RBP9.96□□□□□ -0.82
SMPD3-204ENST00000563396 C16orf74Q96GX8 76 aa9.96□□□□□ -0.82
SMPD3-204ENST00000563396 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
SMPD3-204ENST00000563396 H7BYZ3 331 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 NDUFB4O95168 129 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 PRM2P04554 102 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 PET100P0DJ07 73 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
SMPD3-204ENST00000563396 HIST1H1EP10412 219 aaKnown RBP9.95□□□□□ -0.82
SMPD3-204ENST00000563396 GFI1BQ5VTD9 330 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 POM121L12Q8N7R1 296 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 TMEM263Q8WUH6 116 aaKnown RBP9.95□□□□□ -0.82
SMPD3-204ENST00000563396 FAM167A-AS1Q96KT0 104 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 SLC25A2Q9BXI2 301 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 PPP1R14DQ9NXH3 145 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 PLA2G2EQ9NZK7 142 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 DNAH2Q9P225 4427 aa9.95□□□□□ -0.82
SMPD3-204ENST00000563396 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 MPC2O95563 127 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 PYYP10082 97 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 AZU1P20160 251 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 CLINT1Q14677 625 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 KIR3DS1Q14943 382 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 ZNF493Q6ZR52 646 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 MRPL32Q9BYC8 188 aaKnown RBP9.94□□□□□ -0.82
SMPD3-204ENST00000563396 PARD6GQ9BYG4 376 aaPredicted RBP9.94□□□□□ -0.82
SMPD3-204ENST00000563396 PRELID1Q9Y255 219 aa9.94□□□□□ -0.82
SMPD3-204ENST00000563396 M0R3E3 92 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 SSNA1O43805 119 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 CT45A10P0DMU9 189 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 TMEM88Q6PEY1 159 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 LINC00612Q8N6U2 182 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 LINC01587Q99440 93 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 ATP5SQ99766 215 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 HSPB11Q9Y547 144 aa9.93□□□□□ -0.82
SMPD3-204ENST00000563396 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
SMPD3-204ENST00000563396 LEPP41159 167 aa9.92□□□□□ -0.82
SMPD3-204ENST00000563396 MIR17HGQ75NE6 70 aa9.92□□□□□ -0.82
SMPD3-204ENST00000563396 C15orf53Q8NAA6 179 aa9.92□□□□□ -0.82
SMPD3-204ENST00000563396 FAM19A4Q96LR4 140 aa9.92□□□□□ -0.82
SMPD3-204ENST00000563396 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
SMPD3-204ENST00000563396 KLLNB2CW77 178 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 C17orf112F2Z3M2 114 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 HTN3P15516 51 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 RNF212Q495C1 297 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 FXYD5Q96DB9 178 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 MBD2Q9UBB5 411 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 FUT9Q9Y231 359 aa9.91□□□□□ -0.82
SMPD3-204ENST00000563396 PTTG1O95997 202 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 SLC25A5P05141 298 aaKnown RBP9.9□□□□□ -0.82
SMPD3-204ENST00000563396 C9orf47Q6ZRZ4 202 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 EXOC3-AS1Q8N2X6 119 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 PYGO2Q9BRQ0 406 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 AAMDCQ9H7C9 122 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 TIMM9Q9Y5J7 89 aa9.9□□□□□ -0.82
SMPD3-204ENST00000563396 DNAH17Q9UFH2 4485 aa9.9□□□□□ -0.83
SMPD3-204ENST00000563396 CBY3A6NI87 242 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 ATP5G1P05496 136 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 NBEAP1P0C6P0 100 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 DEFB130BP0DP73 79 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 DEFB130AP0DP74 79 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 CRISP2P16562 243 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 RPL12P30050 165 aaKnown RBP9.89□□□□□ -0.83
SMPD3-204ENST00000563396 ATP5G3P48201 142 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 LGALS9BQ3B8N2 356 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 BLNKQ8WV28 456 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 ZNF503Q96F45 646 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 PHYHIPLQ96FC7 376 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
SMPD3-204ENST00000563396 LINC00467Q9BRT7 94 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms