RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PSMG4Q5JS54 123 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 OR4C5Q8NGB2 326 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 TIMM8BQ9Y5J9 83 aaPredicted RBP10.19□□□□□ -0.78
USB1-207ENST00000563149 TMSB15BA0A087X1C1 80 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 RBAKDNA6NC62 111 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 OR2T8A6NH00 312 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 CKS2P33552 79 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 PAX8Q06710 450 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 FOXC1Q12948 553 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 FAM110DQ8TAY7 271 aaPredicted RBP10.19□□□□□ -0.78
USB1-207ENST00000563149 MCRIP2Q9BUT9 160 aaKnown RBP10.19□□□□□ -0.78
USB1-207ENST00000563149 CNFNQ9BYD5 112 aa10.19□□□□□ -0.78
USB1-207ENST00000563149 CNOT1A5YKK6 2376 aaKnown RBP10.18□□□□□ -0.78
USB1-207ENST00000563149 IGHV7-81A0A0B4J1V7 117 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 MUC21A0A0G2JKD1 596 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 LOC389332A0A1B0GUA5 103 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 NCR2O95944 276 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 SEC11AP67812 179 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 TWIST1Q15672 202 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 C2orf91Q6ZV80 131 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 DYNAPQ8N1N2 210 aa10.18□□□□□ -0.78
USB1-207ENST00000563149 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 SIVA1O15304 175 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 LY6HO94772 140 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 IGHG4P01861 327 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 FAM106CPP0CH98 169 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 LOXL1Q08397 574 aaPredicted RBP10.17□□□□□ -0.78
USB1-207ENST00000563149 FAM106AQ4KMX7 169 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 Q8N9W7 124 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 SLC50A1Q9BRV3 221 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 PKDREJQ9NTG1 2253 aa10.17□□□□□ -0.78
USB1-207ENST00000563149 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
USB1-207ENST00000563149 ADORA2A-AS1P86434 159 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 NHLH1Q02575 133 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 LINC01559Q495D7 138 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 DTX2Q86UW9 622 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 ZNF502Q8TBZ5 544 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 VGLL1Q99990 258 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 TP73-AS1Q9UF72 201 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 ROS1P08922 2347 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 CFAP47Q6ZTR5 3102 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 GOSR1O95249 250 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 IGHV3-23P01764 117 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 FGF6P10767 208 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 TMEM97Q5BJF2 176 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 OR9G4Q8NGQ1 327 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 PIFOQ8TCI5 191 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 SIRPDQ9H106 197 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
USB1-207ENST00000563149 PEF1Q9UBV8 284 aaKnown RBP10.16□□□□□ -0.78
USB1-207ENST00000563149 NPYP01303 97 aa10.15□□□□□ -0.78
USB1-207ENST00000563149 UCNP55089 124 aa10.15□□□□□ -0.78
USB1-207ENST00000563149 KLRB1Q12918 225 aa10.15□□□□□ -0.78
USB1-207ENST00000563149 BOD1L2Q8IYS8 172 aa10.15□□□□□ -0.78
USB1-207ENST00000563149 PIP4P2Q8N4L2 257 aa10.15□□□□□ -0.78
USB1-207ENST00000563149 BUB3O43684 328 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 ORM1P02763 201 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 UBE2E1P51965 193 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 RNASE8Q8TDE3 154 aaKnown RBP10.14□□□□□ -0.79
USB1-207ENST00000563149 MRPL53Q96EL3 112 aaKnown RBP10.14□□□□□ -0.79
USB1-207ENST00000563149 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 COL25A1Q9BXS0 654 aaPredicted RBP10.14□□□□□ -0.79
USB1-207ENST00000563149 ZFAND3Q9H8U3 227 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 NXT2Q9NPJ8 142 aaKnown RBP10.14□□□□□ -0.79
USB1-207ENST00000563149 PRB4P10163 310 aaPredicted RBP10.14□□□□□ -0.79
USB1-207ENST00000563149 CACNG7P62955 275 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 Q8TAT8 98 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 HIF1ANQ9NWT6 349 aa10.14□□□□□ -0.79
USB1-207ENST00000563149 CBY3A6NI87 242 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
USB1-207ENST00000563149 NDUFS7O75251 213 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 HLA-DMBP28068 263 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 CDKN1BP46527 198 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 RBX1P62877 108 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 OR4X2Q8NGF9 303 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
USB1-207ENST00000563149 A6NDN8 102 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 ZFP36P26651 326 aaKnown RBP10.12□□□□□ -0.79
USB1-207ENST00000563149 FCER1GP30273 86 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 HSD52Q0P140 79 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 C15orf32Q32M92 178 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 POLEQ07864 2286 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 RP1L1Q8IWN7 2480 aaPredicted RBP10.12□□□□□ -0.79
USB1-207ENST00000563149 PCNX1Q96RV3 2341 aa10.12□□□□□ -0.79
USB1-207ENST00000563149 A1L4Q6 167 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 SMKR1H3BMG3 65 aa10.11□□□□□ -0.79
USB1-207ENST00000563149 H3BRM9 83 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms