RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 MGST2Q99735 147 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 GPR61Q9BZJ8 451 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 WFDC1Q9HC57 220 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 NPVFQ9HCQ7 196 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 TECRQ9NZ01 308 aaKnown RBP3.32□□□□□ -1.88
SMG1-206ENST00000562668 ZNF256Q9Y2P7 627 aaPredicted RBP3.32□□□□□ -1.88
SMG1-206ENST00000562668 HSPB11Q9Y547 144 aa3.32□□□□□ -1.88
SMG1-206ENST00000562668 PLECQ15149 4684 aaKnown RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 IGHV3OR16-13A0A075B7E8 117 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 IGHV3-74A0A0B4J1X5 117 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 A0A1B0GVG6 124 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 ZFP92A6NM28 416 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 L7N2F9 121 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 AGPAT2O15120 278 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 BCL2L11O43521 198 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 YIF1AO95070 293 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 IL4P05112 153 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 RD3LP0DJH9 198 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 GP9P14770 177 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 PVALBP20472 110 aaPredicted RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 RPL12P30050 165 aaKnown RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 S100A11P31949 105 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 BCAP31P51572 246 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 DEFA6Q01524 100 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 BAXQ07812 192 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 OR2F1Q13607 317 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 OPCMLQ14982 345 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 ATP6V1FQ16864 119 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 C16orf54Q6UWD8 224 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 LINC00322Q6ZN03 302 aaPredicted RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 CYP2G1PQ6ZSU1 146 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 OR11H4Q8NGC9 324 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 OR51G1Q8NGK1 321 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 OR5C1Q8NGR4 320 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 Q8WTZ3 238 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 TMEM37Q8WXS4 190 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 AQP10Q96PS8 301 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 C20orf24Q9BUV8 137 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 RHPN1-AS1Q9BWJ2 59 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 GGTLC1Q9BX51 225 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 PAIP2BQ9ULR5 123 aaKnown RBP3.31□□□□□ -1.88
SMG1-206ENST00000562668 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 RFNGQ9Y644 331 aa3.31□□□□□ -1.88
SMG1-206ENST00000562668 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 TRAV25A0A0B4J276 109 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 IGHV3-66A0A0C4DH42 116 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 SMLR1H3BR10 107 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 H3BRN7 92 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 CFDP00746 253 aaPredicted RBP3.3□□□□□ -1.88
SMG1-206ENST00000562668 RLN2P04090 185 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 CD7P09564 240 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 NPPCP23582 126 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 RPL29P47914 159 aaKnown RBP3.3□□□□□ -1.88
SMG1-206ENST00000562668 EIF2B2P49770 351 aaKnown RBP3.3□□□□□ -1.88
SMG1-206ENST00000562668 SELENOTP62341 195 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 AKR1C1Q04828 323 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 CD300CQ08708 224 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 MIC13Q5XKP0 118 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 STX12Q86Y82 276 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 FAM24BQ8N5W8 94 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 BPIFCQ8NFQ6 507 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 OR2T35Q8NGX2 323 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 GINS3Q9BRX5 216 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 SHANK2-AS3Q9BTD1 123 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 TMEM147Q9BVK8 224 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 NPCDR1Q9BY65 106 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 PARD6GQ9BYG4 376 aaPredicted RBP3.3□□□□□ -1.88
SMG1-206ENST00000562668 WDR61Q9GZS3 305 aaKnown RBP3.3□□□□□ -1.88
SMG1-206ENST00000562668 SLC25A31Q9H0C2 315 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 WFDC10AQ9H1F0 79 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 CYTL1Q9NRR1 136 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 UQCC1Q9NVA1 299 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 RABAC1Q9UI14 185 aa3.3□□□□□ -1.88
SMG1-206ENST00000562668 COL7A1Q02388 2944 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 TRAV2A0A0B4J234 112 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 TRAV8-2A0A0B4J237 113 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 UBE2L5PA0A1B0GUS4 154 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 SMCO3A2RU48 225 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 ZNF98A6NK75 572 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 K7EQG2 157 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 SCGB2A1O75556 95 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 PET100P0DJ07 73 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 CXCL2P19875 107 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 CAMLGP49069 296 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 LYZP61626 148 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 HBG1P69891 147 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 HBG2P69892 147 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 FGL1Q08830 312 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 CLINT1Q14677 625 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 GCSAMLQ5JQS6 135 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 C1orf194Q5T5A4 169 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 LCN12Q6JVE5 192 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 TCF24Q7RTU0 167 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 ZNF546Q86UE3 836 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 TCTE3Q8IZS6 198 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 DYNLRB2Q8TF09 96 aa3.29□□□□□ -1.88
SMG1-206ENST00000562668 GATAD1Q8WUU5 269 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms