RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 CDAP32320 146 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 NCBP2P52298 156 aaKnown RBP eCLIP3.84□□□□□ -1.79
TCF4-215ENST00000562638 LOXL3P58215 753 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 UBE2L3P68036 154 aaKnown RBP3.84□□□□□ -1.79
TCF4-215ENST00000562638 MSMPQ1L6U9 139 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 TMEM155Q4W5P6 130 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 Q6ZRM9 215 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 PLXDC1Q8IUK5 500 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 RNF182Q8N6D2 247 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 MAPKAPK5-AS1Q8N8E1 139 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 OVCA2Q8WZ82 227 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 CCDC140Q96MF4 163 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 ZNF492Q9P255 531 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 SLC25A15Q9Y619 301 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 ARID1AO14497 2285 aa3.84□□□□□ -1.79
TCF4-215ENST00000562638 IGKV1D-42A0A075B6H8 117 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 TRBV19A0A075B6N1 114 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 LINC00473A8K010 186 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 HIGD1CA8MV81 97 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 NPIPB11E5RHQ5 1161 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 K7EMI3 77 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 M0R1B8 84 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 EFNA2O43921 213 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1-39P01597 117 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 P01737 135 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 HBDP02042 147 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1D-39P04432 117 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 P0C879 139 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 IAPPP10997 89 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 CD40P25942 277 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 DUTP33316 252 aaKnown RBP3.83□□□□□ -1.8
TCF4-215ENST00000562638 UBE2E1P51965 193 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 FXYD4P59646 89 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 SFTPA2Q8IWL1 248 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 SFTPA1Q8IWL2 248 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 WFDC11Q8NEX6 87 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 C11orf45Q8TAV5 145 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 FMC1Q96HJ9 113 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 UBE2E2Q96LR5 201 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 DEFB118Q96PH6 123 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 METTL26Q96S19 204 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 AICDAQ9GZX7 198 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 DAZ1Q9NQZ3 744 aaKnown RBP3.83□□□□□ -1.8
TCF4-215ENST00000562638 TMEM167BQ9NRX6 74 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 PEMTQ9UBM1 199 aa3.83□□□□□ -1.8
TCF4-215ENST00000562638 LSM7Q9UK45 103 aaKnown RBP3.83□□□□□ -1.8
TCF4-215ENST00000562638 AMMECR1Q9Y4X0 333 aaPredicted RBP3.83□□□□□ -1.8
TCF4-215ENST00000562638 PHF3Q92576 2039 aaKnown RBP3.83□□□□□ -1.8
TCF4-215ENST00000562638 ATG2BQ96BY7 2078 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 LRP4O75096 1905 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 TRBV7-1A0A0A6YYK4 115 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1-9A0A0C4DH69 117 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 LOC107984156A0A0G2JMH3 177 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 TEX49A0A1B0GTD5 131 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 LOC101059948A0A1B0GTJ6 334 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 PLAC8L1A1L4L8 177 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 PRSS46E5RG02 174 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 WISP1O95388 367 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 IGKV1-5P01602 117 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 GLI4P10075 376 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 RPS27P42677 84 aaKnown RBP3.82□□□□□ -1.8
TCF4-215ENST00000562638 CTXN1P60606 82 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 HERVK_113P61574 105 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 ERVK-16P61578 105 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 DAZ2Q13117 558 aaKnown RBP3.82□□□□□ -1.8
TCF4-215ENST00000562638 TMEM52BQ4KMG9 183 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 Q6ZPA2 131 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 ZNF818PQ6ZRF7 136 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 MRPL55Q7Z7F7 128 aaKnown RBP3.82□□□□□ -1.8
TCF4-215ENST00000562638 DAZ4Q86SG3 579 aaKnown RBP3.82□□□□□ -1.8
TCF4-215ENST00000562638 ARL17AQ8IVW1 177 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 Q8N8P6 123 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 OR8A1Q8NGG7 326 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 NT5CQ8TCD5 201 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 PLPPR2Q96GM1 343 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 EMC6Q9BV81 110 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 TTTY13Q9BZ97 58 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 DAZ3Q9NR90 486 aaKnown RBP3.82□□□□□ -1.8
TCF4-215ENST00000562638 KLK14Q9P0G3 267 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 DKK2Q9UBU2 259 aa3.82□□□□□ -1.8
TCF4-215ENST00000562638 C17orf100A8MU93 164 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 H3BS24 57 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 H3BVH4 76 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 IGLV3-27P01718 113 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 TCRAP04437 139 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 ZNF138P52744 262 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 CRIP2P52943 208 aaPredicted RBP3.81□□□□□ -1.8
TCF4-215ENST00000562638 FKBP1AP62942 108 aaKnown RBP3.81□□□□□ -1.8
TCF4-215ENST00000562638 FKBP1BP68106 108 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
TCF4-215ENST00000562638 SPANXN5Q5MJ07 72 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms