RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 DNAJC4Q9NNZ3 241 aa4.23□□□□□ -1.73
CDH13-206ENST00000562601 MBD2Q9UBB5 411 aa4.23□□□□□ -1.73
CDH13-206ENST00000562601 WDR83OSQ9Y284 106 aa4.23□□□□□ -1.73
CDH13-206ENST00000562601 RFNGQ9Y644 331 aa4.23□□□□□ -1.73
CDH13-206ENST00000562601 TRAV8-2A0A0B4J237 113 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 H3BMM0 161 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 TNFRSF6BO95407 300 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 RPL12P30050 165 aaKnown RBP4.22□□□□□ -1.73
CDH13-206ENST00000562601 PSMB3P49720 205 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 B2MP61769 119 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 SUMO2P61956 95 aaKnown RBP4.22□□□□□ -1.73
CDH13-206ENST00000562601 OPCMLQ14982 345 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 RGS21Q2M5E4 152 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 Q5BKY6 102 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 CASC10Q5T4H9 136 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 Q6ZRG5 221 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 OR4B1Q8NGF8 309 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 OR11H2Q8NH07 326 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 LRRC20Q8TCA0 184 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 RARRES2Q99969 163 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 NPCDR1Q9BY65 106 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 SAV1Q9H4B6 383 aaPredicted RBP4.22□□□□□ -1.73
CDH13-206ENST00000562601 WFDC1Q9HC57 220 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 SLC39A9Q9NUM3 307 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 XCL2Q9UBD3 114 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 HSPB11Q9Y547 144 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 PXMP4Q9Y6I8 212 aa4.22□□□□□ -1.73
CDH13-206ENST00000562601 ALMS1Q8TCU4 4167 aa4.21□□□□□ -1.73
CDH13-206ENST00000562601 PGPEP1LA6NFU8 196 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 ZNF705FA8MVS1 300 aaPredicted RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 C3orf84H3BNL1 204 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 ISLRO14498 428 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 MRPS12O15235 138 aaKnown RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 EIF3GO75821 320 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDH13-206ENST00000562601 HLA-DRB4P13762 266 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 RPL7P18124 248 aaKnown RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 S100A7P31151 101 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 RPL29P47914 159 aaKnown RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 PXDC1Q5TGL8 231 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 FAM78BQ5VT40 261 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 SPATA31B1PQ5VZV4 182 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 EBLN2Q6P2I7 272 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 OR1L4Q8NGR5 311 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 DAZAP1Q96EP5 407 aaKnown RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 GPR82Q96P67 336 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 WDR61Q9GZS3 305 aaKnown RBP4.21□□□□□ -1.74
CDH13-206ENST00000562601 SLC35B3Q9H1N7 401 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 RPRMQ9NS64 109 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 TP53TG1Q9Y2A0 90 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 HLA-DRB4X5D2U9 266 aa4.21□□□□□ -1.74
CDH13-206ENST00000562601 IGHV3OR16-12A0A075B7B8 117 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 A0A087X0K7 114 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 A0A0J9YX75 114 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 H3BQ15 152 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 SMLR1H3BR10 107 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 SLC17A3O00476 420 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 PET100P0DJ07 73 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 PYYP10082 97 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 SPP1P10451 314 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 MEOX2P50222 304 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 OXA1LQ15070 435 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 PSG3Q16557 428 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
CDH13-206ENST00000562601 MIR17HGQ75NE6 70 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 S100A7AQ86SG5 101 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 BPIFA4PQ86YQ2 179 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 CCDC28AQ8IWP9 274 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 ZNF709Q8N972 641 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 CSNK1G2-AS1Q8NCQ2 148 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 SCGB1C1Q8TD33 95 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 GATAD1Q8WUU5 269 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 BLNKQ8WV28 456 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 PFDN5Q99471 154 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 ATP5SQ99766 215 aa4.2□□□□□ -1.74
CDH13-206ENST00000562601 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 FXYD6-FXYD2A0A087WZ82 144 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 CXorf65A6NEN9 183 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 C17orf112F2Z3M2 114 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 M0R2Z0 102 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 MPDU1O75352 247 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 IFNA5P01569 189 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 PRM2P04554 102 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 GIPP09681 153 aaPredicted RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 RBMY1A1P0DJD3 496 aaKnown RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 RBMY1CP0DJD4 496 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 CNN1P51911 297 aaKnown RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 NANOS2P60321 138 aaKnown RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 RHOBP62745 196 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 PSG9Q00887 426 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 HIST1H1AQ02539 215 aaPredicted RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 RBMY1FQ15415 496 aaKnown RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 FFAR4Q5NUL3 377 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 RPUSD4Q96CM3 377 aaKnown RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 SLC25A2Q9BXI2 301 aa4.19□□□□□ -1.74
CDH13-206ENST00000562601 PARD6GQ9BYG4 376 aaPredicted RBP4.19□□□□□ -1.74
CDH13-206ENST00000562601 MFFQ9GZY8 342 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms