RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 RLN2P04090 185 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 PET100P0DJ07 73 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 BCAP31P51572 246 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 SELENOTP62341 195 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 AKR1C1Q04828 323 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 CD300CQ08708 224 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 OR2F1Q13607 317 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 ATP6V1FQ16864 119 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 SIGLEC15Q6ZMC9 328 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 STX12Q86Y82 276 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 TCTE3Q8IZS6 198 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 OR51G1Q8NGK1 321 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 OR5C1Q8NGR4 320 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 OR2K2Q8NGT1 345 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 RNF2Q99496 336 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 C20orf24Q9BUV8 137 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 RHPN1-AS1Q9BWJ2 59 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 PARD6GQ9BYG4 376 aaPredicted RBP4.39□□□□□ -1.71
LRRC28-220ENST00000561253 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 SLC25A31Q9H0C2 315 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 NPVFQ9HCQ7 196 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 UQCC1Q9NVA1 299 aa4.39□□□□□ -1.71
LRRC28-220ENST00000561253 TECRQ9NZ01 308 aaKnown RBP4.39□□□□□ -1.71
LRRC28-220ENST00000561253 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
LRRC28-220ENST00000561253 IGHV3OR16-13A0A075B7E8 117 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 A0A087X0K7 114 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 IGHV3-74A0A0B4J1X5 117 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 TRAV25A0A0B4J276 109 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 UBE2L5PA0A1B0GUS4 154 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 H3BRN7 92 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 MRPS12O15235 138 aaKnown RBP4.38□□□□□ -1.71
LRRC28-220ENST00000561253 YIF1AO95070 293 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 CFDP00746 253 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-220ENST00000561253 PRB2P02812 416 aaPredicted RBP4.38□□□□□ -1.71
LRRC28-220ENST00000561253 IL4P05112 153 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 C4BPBP20851 252 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 RPL29P47914 159 aaKnown RBP4.38□□□□□ -1.71
LRRC28-220ENST00000561253 HBG1P69891 147 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 HBG2P69892 147 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 FGL1Q08830 312 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 CLINT1Q14677 625 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 Q8WTZ3 238 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 TMEM37Q8WXS4 190 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 ATP5SQ99766 215 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 NPCDR1Q9BY65 106 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 WDR61Q9GZS3 305 aaKnown RBP4.38□□□□□ -1.71
LRRC28-220ENST00000561253 CYTL1Q9NRR1 136 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 RFNGQ9Y644 331 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 STARD9Q9P2P6 4700 aa4.38□□□□□ -1.71
LRRC28-220ENST00000561253 IGHV3-66A0A0C4DH42 116 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SMCO3A2RU48 225 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 HMSDA8MTL9 139 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SOCS3O14543 225 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 MPDU1O75352 247 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 CXCL2P19875 107 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 NPPCP23582 126 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 CAMLGP49069 296 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 EIF2B2P49770 351 aaKnown RBP4.37□□□□□ -1.71
LRRC28-220ENST00000561253 LYZP61626 148 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 GCSAMLQ5JQS6 135 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 C1orf194Q5T5A4 169 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 MIC13Q5XKP0 118 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 LCN12Q6JVE5 192 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 ZNF546Q86UE3 836 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 FAM24BQ8N5W8 94 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 BPIFCQ8NFQ6 507 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 DCANP1Q8TF63 244 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 METTL26Q96S19 204 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SPAG8Q99932 426 aaPredicted RBP4.37□□□□□ -1.71
LRRC28-220ENST00000561253 OVOL2Q9BRP0 275 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 GINS3Q9BRX5 216 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SHANK2-AS3Q9BTD1 123 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SLC25A39Q9BZJ4 359 aaPredicted RBP4.37□□□□□ -1.71
LRRC28-220ENST00000561253 ARV1Q9H2C2 271 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SLC39A9Q9NUM3 307 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 SMAD5-AS1Q9Y6J3 95 aa4.37□□□□□ -1.71
LRRC28-220ENST00000561253 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 FXYD6-FXYD2A0A087WZ82 144 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 K7EQG2 157 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 SCGB2A1O75556 95 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 C1QBP02746 253 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 FABP1P07148 127 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 CD7P09564 240 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 OR5G3P0C626 314 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 GP9P14770 177 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 FGF7P21781 194 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 B2MP61769 119 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 ZNF345Q14585 488 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 C14orf177Q52M58 125 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 RPL7L1Q6DKI1 246 aaKnown RBP4.36□□□□□ -1.71
LRRC28-220ENST00000561253 LAMTOR1Q6IAA8 161 aa4.36□□□□□ -1.71
LRRC28-220ENST00000561253 LINC00322Q6ZN03 302 aaPredicted RBP4.36□□□□□ -1.71
LRRC28-220ENST00000561253 Q6ZVQ6 151 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms