RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 C3orf84H3BNL1 204 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 M0R3E3 92 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 PRM2P04554 102 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 CXCL2P19875 107 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 RANP62826 216 aaKnown RBP6.21□□□□□ -1.42
USP3-217ENST00000560070 ZNF266Q14584 549 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 GUK1Q16774 197 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 Q6ZNX1 250 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 OR10J6PQ8NGY7 276 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 OR2G3Q8NGZ4 309 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 IL17DQ8TAD2 202 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 ZNF503Q96F45 646 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 HYLS1Q96M11 299 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 C1QTNF4Q9BXJ3 329 aa6.21□□□□□ -1.42
USP3-217ENST00000560070 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.42
USP3-217ENST00000560070 CXorf65A6NEN9 183 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 RBMY1A1P0DJD3 496 aaKnown RBP6.2□□□□□ -1.42
USP3-217ENST00000560070 RBMY1CP0DJD4 496 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 HTN1P15515 57 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 TAS2R45P59539 299 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 NANOS2P60321 138 aaKnown RBP6.2□□□□□ -1.42
USP3-217ENST00000560070 UBE2L3P68036 154 aaKnown RBP6.2□□□□□ -1.42
USP3-217ENST00000560070 RBMY1FQ15415 496 aaKnown RBP6.2□□□□□ -1.42
USP3-217ENST00000560070 TMEM41BQ5BJD5 291 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 CASC10Q5T4H9 136 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 BAP18Q8IXM2 172 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 C1orf158Q8N1D5 194 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 FXYD5Q96DB9 178 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 PHYHIPLQ96FC7 376 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 TMEM208Q9BTX3 173 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 CYTL1Q9NRR1 136 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 X6R8D5 127 aa6.2□□□□□ -1.42
USP3-217ENST00000560070 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
USP3-217ENST00000560070 PGPA6NDG6 321 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 ZNF705GA8MUZ8 300 aaPredicted RBP6.19□□□□□ -1.42
USP3-217ENST00000560070 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
USP3-217ENST00000560070 CT45A10P0DMU9 189 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 KIR3DS1Q14943 382 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 KHDC3LQ587J8 217 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 ZNF767PQ75MW2 155 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 IQCF2Q8IXL9 164 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 RPP25LQ8N5L8 163 aaKnown RBP6.19□□□□□ -1.42
USP3-217ENST00000560070 C11orf45Q8TAV5 145 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 GNPNAT1Q96EK6 184 aaPredicted RBP6.19□□□□□ -1.42
USP3-217ENST00000560070 ST6GAL2Q96JF0 529 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 LINC01587Q99440 93 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 RPH3ALQ9UNE2 315 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 GOLT1BQ9Y3E0 138 aa6.19□□□□□ -1.42
USP3-217ENST00000560070 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 A0A1B0GVG6 124 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 ZNF705EA8MWA4 302 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 BOLA2-SMG1P6H3BVE0 249 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 TAAR5O14804 337 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 CRXO43186 299 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 JTBO76095 146 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 MIFP14174 115 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 TMUB2Q71RG4 321 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 KCNRGQ8N5I3 272 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 Q8NAQ8 132 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 IGF2BP2-AS1Q96M15 143 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 VGLL1Q99990 258 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 PSMG3Q9BT73 122 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 ZNF471Q9BX82 626 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 ACTR3CQ9C0K3 210 aaPredicted RBP6.18□□□□□ -1.42
USP3-217ENST00000560070 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 Q9H3A6 140 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 PRELID1Q9Y255 219 aa6.18□□□□□ -1.42
USP3-217ENST00000560070 A8MTW9 85 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 PFDN1O60925 122 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 ZNF253O75346 499 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 INSP01308 110 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 HBE1P02100 147 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 MBP02144 154 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 AMBPP02760 352 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 ARL14EPLP0DKL9 152 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 AZU1P20160 251 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 CSN1S1P47710 185 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 SERF2P84101 59 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 PDE6HQ13956 83 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 AKR1C8PQ5T2L2 129 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 SSX7Q7RTT5 188 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
USP3-217ENST00000560070 NBEAL2Q6ZNJ1 2754 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 TRAV12-3A0A0B4J271 114 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 A0A0D9SG52 128 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 A0A1B0GV50 99 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 KANTRA0A1W2PQU2 76 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 HMSDA8MTL9 139 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 NPIPB6E9PJ23 425 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 GCHFRP30047 84 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 TSPOP30536 169 aa6.16□□□□□ -1.42
USP3-217ENST00000560070 RNASE4P34096 147 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms