RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ABCA7Q8IZY2 2146 aa11.28□□□□□ -0.6
CSPG4P12-202ENST00000559989 ETDCA0A1B0GVM5 59 aa11.27□□□□□ -0.6
CSPG4P12-202ENST00000559989 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.6
CSPG4P12-202ENST00000559989 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.6
CSPG4P12-202ENST00000559989 WISP3O95389 354 aaPredicted RBP11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 WBP1Q96G27 269 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 CASP8AP2Q9UKL3 1982 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 NMSQ5H8A3 153 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 VSIG2Q96IQ7 327 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 LY6G6FQ5SQ64 297 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 LTBP4Q8N2S1 1624 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 APC2O95996 2303 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 F5P12259 2224 aa11.27□□□□□ -0.61
CSPG4P12-202ENST00000559989 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 RHPN1-AS1Q9BWJ2 59 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 GTF3C1Q12789 2109 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 C5orf64Q2M2E5 130 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 HERV-K104P63124 156 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 EML6Q6ZMW3 1958 aa11.26□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZNF492Q9P255 531 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 NREPQ16612 68 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 CELA3AP09093 270 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 C9orf106Q8NAJ2 232 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 H0YJW9 148 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 LYL1P12980 280 aa11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGLV3-21P80748 117 aaPredicted RBP11.25□□□□□ -0.61
CSPG4P12-202ENST00000559989 NPYP01303 97 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 PSPNO60542 156 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 DEFB131AP59861 70 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 C8orf49Q96NF6 230 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 PRR15LQ9BU68 103 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGHV1-18A0A0C4DH31 117 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 H3BUX3 64 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 NTN3O00634 580 aaPredicted RBP11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 BTCP35070 178 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZNRF2Q8NHG8 242 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 C20orf204Q6ZNR8 217 aa11.24□□□□□ -0.61
CSPG4P12-202ENST00000559989 B4DSR2 109 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 BUB3O43684 328 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 SBF2Q86WG5 1849 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGKV1D-43A0A0B4J1Z2 117 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 H0YIZ8 118 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 F8VRH5 84 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 LYZL4Q96KX0 146 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 INTS1Q8N201 2190 aaKnown RBP11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 J3QQQ9 107 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 CASC2Q6XLA1 102 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 NPSP0C0P6 89 aa11.23□□□□□ -0.61
CSPG4P12-202ENST00000559989 LINC01619G3V211 115 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 NDUFB8O95169 186 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 K7ERJ3 54 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 C12orf74Q32Q52 190 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 U3KQE9 123 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 TEX22C9J3V5 150 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 C9JQL5 133 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 SIGLEC9Q9Y336 463 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 NYNRINQ9P2P1 1898 aaKnown RBP11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 DYSFO75923 2080 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 NTF4P34130 210 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 SHANK2-AS3Q9BTD1 123 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZGRF1Q86YA3 2104 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGHV1OR15-1A0A075B7D0 117 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 EFNA4P52798 201 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGFL4Q6B9Z1 124 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 SLC25A29Q8N8R3 303 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 IGF2BP2-AS1Q96M15 143 aa11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 ZNF672Q499Z4 452 aaPredicted RBP11.21□□□□□ -0.61
CSPG4P12-202ENST00000559989 TMEM178BH3BS89 294 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 TMEM14EPQ6UXP3 125 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 TMEM213A2RRL7 107 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 PRSS47A8MTI9 375 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 RPP25LQ8N5L8 163 aaKnown RBP11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 C18orf32Q8TCD1 76 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.62
CSPG4P12-202ENST00000559989 CDKN1BP46527 198 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms