RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ZNF253O75346 499 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 DUSP14O95147 198 aaKnown RBP13.52□□□□□ -0.25
CASC4-209ENST00000559222 M6PRP20645 277 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 RHOBP62745 196 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 ACOT6Q3I5F7 207 aaPredicted RBP13.52□□□□□ -0.25
CASC4-209ENST00000559222 BAP18Q8IXM2 172 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 RNF141Q8WVD5 230 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 ST6GAL2Q96JF0 529 aa13.52□□□□□ -0.25
CASC4-209ENST00000559222 hCG_2014768A0A024R1R8 64 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 NBEAP1P0C6P0 100 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 KIR3DS1Q14943 382 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
CASC4-209ENST00000559222 SSX7Q7RTT5 188 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 OR10G4Q8NGN3 311 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 OR10G9Q8NGN4 311 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 OR10G7Q8NGN6 311 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 PSMG3Q9BT73 122 aaPredicted RBP13.51□□□□□ -0.25
CASC4-209ENST00000559222 C1QTNF4Q9BXJ3 329 aa13.51□□□□□ -0.25
CASC4-209ENST00000559222 C11orf68Q9H3H3 251 aaKnown RBP13.51□□□□□ -0.25
CASC4-209ENST00000559222 DYNC2H1Q8NCM8 4307 aaKnown RBP13.5□□□□□ -0.25
CASC4-209ENST00000559222 BOLA2-SMG1P6H3BVE0 249 aa13.5□□□□□ -0.25
CASC4-209ENST00000559222 PRM2P04554 102 aa13.5□□□□□ -0.25
CASC4-209ENST00000559222 UBE2L3P68036 154 aaKnown RBP13.5□□□□□ -0.25
CASC4-209ENST00000559222 PMS2P11Q13670 270 aa13.5□□□□□ -0.25
CASC4-209ENST00000559222 ICAM4Q14773 271 aa13.5□□□□□ -0.25
CASC4-209ENST00000559222 RPP25LQ8N5L8 163 aaKnown RBP13.5□□□□□ -0.25
CASC4-209ENST00000559222 ERCC8Q13216 396 aa13.49□□□□□ -0.25
CASC4-209ENST00000559222 PDE6HQ13956 83 aa13.49□□□□□ -0.25
CASC4-209ENST00000559222 KHDC3LQ587J8 217 aa13.49□□□□□ -0.25
CASC4-209ENST00000559222 IGKV2-40A0A087WW87 121 aaPredicted RBP13.48□□□□□ -0.25
CASC4-209ENST00000559222 IGKV2D-40P01614 121 aaPredicted RBP13.48□□□□□ -0.25
CASC4-209ENST00000559222 NANOS2P60321 138 aaKnown RBP13.48□□□□□ -0.25
CASC4-209ENST00000559222 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
CASC4-209ENST00000559222 IGF2BP2-AS1Q96M15 143 aa13.48□□□□□ -0.25
CASC4-209ENST00000559222 CELA1Q9UNI1 258 aa13.48□□□□□ -0.25
CASC4-209ENST00000559222 BORCS7-ASMTA0A0B4J1R7 106 aa13.47□□□□□ -0.25
CASC4-209ENST00000559222 NPIPB6E9PJ23 425 aa13.47□□□□□ -0.25
CASC4-209ENST00000559222 CT45A10P0DMU9 189 aa13.47□□□□□ -0.25
CASC4-209ENST00000559222 MIFP14174 115 aa13.47□□□□□ -0.25
CASC4-209ENST00000559222 CDC34P49427 236 aaPredicted RBP13.47□□□□□ -0.25
CASC4-209ENST00000559222 MRPL53Q96EL3 112 aaKnown RBP13.47□□□□□ -0.25
CASC4-209ENST00000559222 A0A1W2PPV4 95 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 ARL14EPLP0DKL9 152 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 TAS2R45P59539 299 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
CASC4-209ENST00000559222 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 OR10J6PQ8NGY7 276 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 RAB24Q969Q5 203 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 Q9H3A6 140 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 PLA2G2EQ9NZK7 142 aa13.46□□□□□ -0.25
CASC4-209ENST00000559222 A0A1B0GVG6 124 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 HMSDA8MTL9 139 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 J3KRW8 73 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 CD300CQ08708 224 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 ZNF345Q14585 488 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 VGLL1Q99990 258 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 AAMDCQ9H7C9 122 aa13.45□□□□□ -0.26
CASC4-209ENST00000559222 CXorf65A6NEN9 183 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 INSP01308 110 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 STAG3L2P0CL84 134 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 STAG3L3P0CL85 134 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 SERF2P84101 59 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 ZNF767PQ75MW2 155 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 GNPNAT1Q96EK6 184 aaPredicted RBP13.44□□□□□ -0.26
CASC4-209ENST00000559222 NEU1Q99519 415 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 ARPC5LQ9BPX5 153 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 PRELID1Q9Y255 219 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 GOLT1BQ9Y3E0 138 aa13.44□□□□□ -0.26
CASC4-209ENST00000559222 ZNF705GA8MUZ8 300 aaPredicted RBP13.43□□□□□ -0.26
CASC4-209ENST00000559222 TAAR5O14804 337 aa13.43□□□□□ -0.26
CASC4-209ENST00000559222 AMBPP02760 352 aa13.43□□□□□ -0.26
CASC4-209ENST00000559222 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
CASC4-209ENST00000559222 C11orf45Q8TAV5 145 aa13.43□□□□□ -0.26
CASC4-209ENST00000559222 PLECQ15149 4684 aaKnown RBP13.43□□□□□ -0.26
CASC4-209ENST00000559222 BCL2L11O43521 198 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 JTBO76095 146 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 CDKN1BP46527 198 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 EMP1P54849 157 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 PQLC2Q6ZP29 291 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 TCTE3Q8IZS6 198 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 Q8TAT8 98 aa13.42□□□□□ -0.26
CASC4-209ENST00000559222 AZU1P20160 251 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 GCHFRP30047 84 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 PRR9Q5T870 116 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 FAM19A4Q96LR4 140 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 HYLS1Q96M11 299 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 TMEM208Q9BTX3 173 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 ACTR3CQ9C0K3 210 aaPredicted RBP13.41□□□□□ -0.26
CASC4-209ENST00000559222 RPH3ALQ9UNE2 315 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 SACSQ9NZJ4 4579 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 TENM2Q9NT68 2774 aa13.41□□□□□ -0.26
CASC4-209ENST00000559222 ALMS1Q8TCU4 4167 aa13.4□□□□□ -0.26
CASC4-209ENST00000559222 LOC102723971A0A1B0GUV8 181 aa13.4□□□□□ -0.26
CASC4-209ENST00000559222 MBP02144 154 aa13.4□□□□□ -0.26
CASC4-209ENST00000559222 GNG5P63218 68 aa13.4□□□□□ -0.26
CASC4-209ENST00000559222 TMUB2Q71RG4 321 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms