RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 CCL16O15467 120 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 ARPC5O15511 151 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 IGLV1-51P01701 117 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 TRACP01848 142 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 PAEPP09466 180 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
GABPB1-209ENST00000559100 CRYGSP22914 178 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 FOXA3P55318 350 aaPredicted RBP0.95□□□□□ -2.26
GABPB1-209ENST00000559100 ARPC4P59998 168 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 CNBPP62633 177 aaKnown RBP0.95□□□□□ -2.26
GABPB1-209ENST00000559100 PSPHP78330 225 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 DIAPH2-AS1Q14236 149 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 TMEM14EPQ6UXP3 125 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 ARL17AQ8IVW1 177 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 DEFB119Q8N690 84 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 FKBP11Q9NYL4 201 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 JPT1Q9UK76 154 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 FREM1Q5H8C1 2179 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 BAZ2BQ9UIF8 2168 aaKnown RBP0.95□□□□□ -2.26
GABPB1-209ENST00000559100 PCDH15Q96QU1 1955 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 OVOS2A0A0G2JMS6 1433 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 KDM6AO15550 1401 aaPredicted RBP0.95□□□□□ -2.26
GABPB1-209ENST00000559100 UBR2Q8IWV8 1755 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 ARHGEF10O15013 1369 aa0.95□□□□□ -2.26
GABPB1-209ENST00000559100 MYH10P35580 1976 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 ZCCHC11Q5TAX3 1644 aaKnown RBP0.94□□□□□ -2.26
GABPB1-209ENST00000559100 STRCQ7RTU9 1775 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 TRBV7-6A0A0J9YX20 115 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 C3orf85A0A1B0GTC6 90 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 LOC107986453A0A1B0GWG9 222 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 A0A1B0GX51 115 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 C9JAW5 83 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 GEMIN2O14893 280 aaKnown RBP0.94□□□□□ -2.26
GABPB1-209ENST00000559100 HCRTO43612 131 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 TNFSF15O95150 251 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 MT-ND4LP03901 98 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 RPL22P35268 128 aaKnown RBP0.94□□□□□ -2.26
GABPB1-209ENST00000559100 CKS1BP61024 79 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 PSG9Q00887 426 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 MPV17LQ2QL34 196 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 UNQ6190/PRO20217Q6UXQ8 127 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 ZNF833PQ6ZTB9 187 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 OR5AS1Q8N127 324 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 OR5A2Q8NGI9 324 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 Q8TAT8 98 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 CLEC2BQ92478 149 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 DIRC1Q969H9 104 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 CST11Q9H112 138 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 TAF9BQ9HBM6 251 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 TMEM14CQ9P0S9 112 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 HIGD1AQ9Y241 93 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 CHCHD2Q9Y6H1 151 aaPredicted RBP0.94□□□□□ -2.26
GABPB1-209ENST00000559100 DLC1Q96QB1 1528 aa0.94□□□□□ -2.26
GABPB1-209ENST00000559100 HEATR5BQ9P2D3 2071 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 COL5A3P25940 1745 aaPredicted RBP0.93□□□□□ -2.26
GABPB1-209ENST00000559100 KIAA1107Q9UPP5 1409 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 TRBV6-4A0A1B0GX49 114 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 SMIM24O75264 130 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 OR2H2O95918 312 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 SAA1P0DJI8 122 aaPredicted RBP0.93□□□□□ -2.26
GABPB1-209ENST00000559100 COX7CP15954 63 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 ZNF25P17030 456 aaPredicted RBP0.93□□□□□ -2.26
GABPB1-209ENST00000559100 HSD17B12Q53GQ0 312 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 TMEM244Q5VVB8 128 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 GLIPR1L1Q6UWM5 242 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 CASC2Q6XLA1 102 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 MED12LQ86YW9 2145 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 MORN4Q8NDC4 146 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 OR10AG1Q8NH19 301 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 C10orf105Q8TEF2 133 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 LINC00052Q96N35 136 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 MRPL57Q9BQC6 102 aaKnown RBP0.93□□□□□ -2.26
GABPB1-209ENST00000559100 FAM107BQ9H098 131 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 CYSTM1Q9H1C7 97 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 HSPB8Q9UJY1 196 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 EML6Q6ZMW3 1958 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 COL11A1P12107 1806 aaPredicted RBP0.93□□□□□ -2.26
GABPB1-209ENST00000559100 PIK3C2AO00443 1686 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 ADGBQ8N7X0 1667 aa0.93□□□□□ -2.26
GABPB1-209ENST00000559100 DSPPQ9NZW4 1301 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 A0A087WSZ3 146 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 BBIP1A8MTZ0 92 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 CCL25O15444 150 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 KLF7O75840 302 aaPredicted RBP0.92□□□□□ -2.26
GABPB1-209ENST00000559100 HBDP02042 147 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 TCRAP04437 139 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 SCTP09683 121 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 CKS2P33552 79 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 PCBD1P61457 104 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 BLCAPP62952 87 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 SARNPP82979 210 aaKnown RBP0.92□□□□□ -2.26
GABPB1-209ENST00000559100 MIR22HGQ0VDD5 57 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 NEDD8Q15843 81 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 FOXI2Q6ZQN5 318 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 PATE1Q8WXA2 126 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 MAGOHBQ96A72 148 aaKnown RBP0.92□□□□□ -2.26
GABPB1-209ENST00000559100 SMIM3Q9BZL3 60 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 BANF2Q9H503 90 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 COPZ2Q9P299 210 aa0.92□□□□□ -2.26
GABPB1-209ENST00000559100 TNFSF18Q9UNG2 199 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms