RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 RBMY1A1P0DJD3 496 aaKnown RBP8.3□□□□□ -1.08
SNX1-204ENST00000559061 RBMY1CP0DJD4 496 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 SERF2P84101 59 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 PDE6HQ13956 83 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 RBMY1FQ15415 496 aaKnown RBP8.3□□□□□ -1.08
SNX1-204ENST00000559061 GUK1Q16774 197 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 TMEM41BQ5BJD5 291 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
SNX1-204ENST00000559061 AKAP14Q86UN6 197 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 C9orf62Q8N4C0 152 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 RAB24Q969Q5 203 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 RPUSD4Q96CM3 377 aaKnown RBP8.3□□□□□ -1.08
SNX1-204ENST00000559061 ZMAT4Q9H898 229 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 RNF24Q9Y225 148 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 X6R8D5 127 aa8.3□□□□□ -1.08
SNX1-204ENST00000559061 A0A0D9SG52 128 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 OR7C2O60412 319 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 JTBO76095 146 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 ARL14EPLP0DKL9 152 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 CDC34P49427 236 aaPredicted RBP8.29□□□□□ -1.08
SNX1-204ENST00000559061 FHITP49789 147 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 UBE2L3P68036 154 aaKnown RBP8.29□□□□□ -1.08
SNX1-204ENST00000559061 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 KHDC3LQ587J8 217 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 OR4B1Q8NGF8 309 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
SNX1-204ENST00000559061 XCL2Q9UBD3 114 aa8.29□□□□□ -1.08
SNX1-204ENST00000559061 ZNF705EA8MWA4 302 aaPredicted RBP8.28□□□□□ -1.08
SNX1-204ENST00000559061 M0R2Z0 102 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 PSG9Q00887 426 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 HIST1H1AQ02539 215 aaPredicted RBP8.28□□□□□ -1.08
SNX1-204ENST00000559061 ICAM4Q14773 271 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 Q8NAQ8 132 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 STOML3Q8TAV4 291 aa8.28□□□□□ -1.08
SNX1-204ENST00000559061 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
SNX1-204ENST00000559061 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 CT45A10P0DMU9 189 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 GCHFRP30047 84 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 ERCC8Q13216 396 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 SPINK13Q1W4C9 94 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 EBLN2Q6P2I7 272 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 ZNF705AQ6ZN79 300 aaPredicted RBP8.27□□□□□ -1.09
SNX1-204ENST00000559061 LRRC20Q8TCA0 184 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 WWC2-AS2Q96NR7 200 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 ZNF471Q9BX82 626 aaPredicted RBP8.27□□□□□ -1.09
SNX1-204ENST00000559061 Q9H3A6 140 aa8.27□□□□□ -1.09
SNX1-204ENST00000559061 IGKV2-40A0A087WW87 121 aaPredicted RBP8.26□□□□□ -1.09
SNX1-204ENST00000559061 A0A0J9YWU9 116 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 A0A1W2PPV4 95 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 KANTRA0A1W2PQU2 76 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 IGKV2D-40P01614 121 aaPredicted RBP8.26□□□□□ -1.09
SNX1-204ENST00000559061 PRM2P04554 102 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 NKX2-5P52952 324 aaPredicted RBP8.26□□□□□ -1.09
SNX1-204ENST00000559061 TAS2R45P59539 299 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 RANP62826 216 aaKnown RBP8.26□□□□□ -1.09
SNX1-204ENST00000559061 PQLC2Q6ZP29 291 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 BAP18Q8IXM2 172 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 OR11H2Q8NH07 326 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 HYLS1Q96M11 299 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 VGLL1Q99990 258 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 TMPRSS5Q9H3S3 457 aa8.26□□□□□ -1.09
SNX1-204ENST00000559061 TRAV12-2A0A075B6T6 113 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 CTXND1A0A1B0GTU2 59 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 BOLA2-SMG1P6H3BVE0 249 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 DEFB4AO15263 64 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 DUSP14O95147 198 aaKnown RBP8.25□□□□□ -1.09
SNX1-204ENST00000559061 MBP02144 154 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 SEC11BP0C7V7 166 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
SNX1-204ENST00000559061 PLECQ15149 4684 aaKnown RBP8.25□□□□□ -1.09
SNX1-204ENST00000559061 PRR9Q5T870 116 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 TMED6Q8WW62 240 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
SNX1-204ENST00000559061 AGPAT4-IT1Q9H0P7 198 aa8.25□□□□□ -1.09
SNX1-204ENST00000559061 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
SNX1-204ENST00000559061 IGHV4-28A0A0C4DH34 117 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 GNG5P63218 68 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 Q6ZQT7 251 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 C9orf47Q6ZRZ4 202 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 RARRES2Q99969 163 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 OTORQ9NRC9 128 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 PRELID1Q9Y255 219 aa8.24□□□□□ -1.09
SNX1-204ENST00000559061 YTHDF2Q9Y5A9 579 aaKnown RBP8.24□□□□□ -1.09
SNX1-204ENST00000559061 DIRC3C9JPN6 131 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 PFDN1O60925 122 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 CXorf1O96002 111 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 ZFP69Q49AA0 526 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 AKR1C8PQ5T2L2 129 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 GFI1BQ5VTD9 330 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 ZFAND2AQ8N6M9 145 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 Q8TAT8 98 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 IGF2BP2-AS1Q96M15 143 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 ODF3Q96PU9 254 aa8.23□□□□□ -1.09
SNX1-204ENST00000559061 C11orf68Q9H3H3 251 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms