RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ARL6Q9H0F7 186 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 MGAT4CQ9UBM8 478 aa5.21□□□□□ -1.58
SPG11-213ENST00000558988 DYNC2H1Q8NCM8 4307 aaKnown RBP5.21□□□□□ -1.58
SPG11-213ENST00000558988 TRAV8-2A0A0B4J237 113 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 NAP1L6A6NFF2 107 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 H3BRN7 92 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 H3BTX0 84 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 GOSR2O14653 212 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 S100A7P31151 101 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 PAX9P55771 341 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 SPATA31B1PQ5VZV4 182 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 TMEM88Q6PEY1 159 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 TMEM144Q7Z5S9 345 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 OR11H7Q8NGC8 314 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 OR10P1Q8NGE3 313 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 OR4D5Q8NGN0 318 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 GPR82Q96P67 336 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 SHANK2-AS3Q9BTD1 123 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 RBM38Q9H0Z9 239 aaKnown RBP5.2□□□□□ -1.58
SPG11-213ENST00000558988 RCL1Q9Y2P8 373 aaKnown RBP5.2□□□□□ -1.58
SPG11-213ENST00000558988 LSM5Q9Y4Y9 91 aaKnown RBP5.2□□□□□ -1.58
SPG11-213ENST00000558988 DNAH7Q8WXX0 4024 aa5.2□□□□□ -1.58
SPG11-213ENST00000558988 TRAV6A0A075B6T7 132 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 TEX48A0A1B0GUV7 120 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 F5H768 121 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 BOLA2-SMG1P6H3BVE0 249 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 L7N2F9 121 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 DUSP14O95147 198 aaKnown RBP5.19□□□□□ -1.58
SPG11-213ENST00000558988 RPL7P18124 248 aaKnown RBP5.19□□□□□ -1.58
SPG11-213ENST00000558988 BCAP31P51572 246 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 DLK1P80370 383 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 ZNF846Q147U1 533 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 FCN2Q15485 313 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 AMTNQ6UX39 209 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 DEDD2Q8WXF8 326 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 SMIM8Q96KF7 97 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 IGF2BP2-AS1Q96M15 143 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 C17orf77Q96MU5 243 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 LINC01587Q99440 93 aa5.19□□□□□ -1.58
SPG11-213ENST00000558988 PARD6GQ9BYG4 376 aaPredicted RBP5.19□□□□□ -1.58
SPG11-213ENST00000558988 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
SPG11-213ENST00000558988 C5orf51A6NDU8 294 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 PMS2P5A8MQ11 134 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 COX7A2P2O60397 106 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 CST7O76096 145 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 IL7P13232 177 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 CXCL3P19876 107 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 AZU1P20160 251 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 BTCP35070 178 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 CAV2P51636 162 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 S100A10P60903 97 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 SELENOTP62341 195 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 ARL16Q0P5N6 197 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 RPUSD4Q96CM3 377 aaKnown RBP5.18□□□□□ -1.58
SPG11-213ENST00000558988 SDHCQ99643 169 aaPredicted RBP5.18□□□□□ -1.58
SPG11-213ENST00000558988 SEC22CQ9BRL7 303 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 ATG101Q9BSB4 218 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 C20orf85Q9H1P6 137 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 ARV1Q9H2C2 271 aa5.18□□□□□ -1.58
SPG11-213ENST00000558988 AGPAT2O15120 278 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 CRXO43186 299 aaPredicted RBP5.17□□□□□ -1.58
SPG11-213ENST00000558988 MBPP02686 304 aaPredicted RBP5.17□□□□□ -1.58
SPG11-213ENST00000558988 PSG3Q16557 428 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 DGAT2L7PQ6IED9 249 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 TMEM14EPQ6UXP3 125 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 PATE2Q6UY27 113 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 LINC00336Q6ZUF6 198 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 LINC00305Q7Z4B0 112 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 S100A7AQ86SG5 101 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 ZNF546Q86UE3 836 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 NPVFQ9HCQ7 196 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 NUDT15Q9NV35 164 aa5.17□□□□□ -1.58
SPG11-213ENST00000558988 HYDINQ4G0P3 5121 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 TRAV5A0A0B4J249 113 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 UBE2L5PA0A1B0GUS4 154 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 C7orf66A4D0T2 115 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 FAM24AA6NFZ4 105 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 ZNF701M0R085 212 aaPredicted RBP5.16□□□□□ -1.58
SPG11-213ENST00000558988 SLC17A3O00476 420 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 RTL8CO15255 209 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 LYRM1O43325 122 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 TSC22D2O75157 780 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 CAMLGP49069 296 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 BAXQ07812 192 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 C10orf113Q5VZT2 155 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 MIC13Q5XKP0 118 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 OR10J6PQ8NGY7 276 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 MITD1Q8WV92 249 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 MGST2Q99735 147 aa5.16□□□□□ -1.58
SPG11-213ENST00000558988 NOP10Q9NPE3 64 aaKnown RBP5.16□□□□□ -1.58
SPG11-213ENST00000558988 ALMS1Q8TCU4 4167 aa5.15□□□□□ -1.58
SPG11-213ENST00000558988 BIRC6Q9NR09 4857 aa5.15□□□□□ -1.58
SPG11-213ENST00000558988 A0A087X0K7 114 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 LYRM9A8MSI8 78 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 A8MTW9 85 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 PRAC2D3DTV9 90 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 K7EPK0 472 aa5.15□□□□□ -1.59
SPG11-213ENST00000558988 PLA2G10O15496 165 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms