RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 C5orf17Q8NAS9 161 aa13.52□□□□□ -0.25
CLPX-203ENST00000558958 TCEAL7Q9BRU2 100 aa13.52□□□□□ -0.25
CLPX-203ENST00000558958 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 SNRPD3P62318 126 aaKnown RBP13.51□□□□□ -0.25
CLPX-203ENST00000558958 EIF4E3Q8N5X7 224 aaKnown RBP13.51□□□□□ -0.25
CLPX-203ENST00000558958 CMTM2Q8TAZ6 248 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 MRPL53Q96EL3 112 aaKnown RBP13.51□□□□□ -0.25
CLPX-203ENST00000558958 LINC00052Q96N35 136 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 SMDT1Q9H4I9 107 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
CLPX-203ENST00000558958 ZNF705FA8MVS1 300 aaPredicted RBP13.5□□□□□ -0.25
CLPX-203ENST00000558958 C9JQL5 133 aa13.5□□□□□ -0.25
CLPX-203ENST00000558958 PDE6DO43924 150 aa13.5□□□□□ -0.25
CLPX-203ENST00000558958 NDUFS6O75380 124 aaKnown RBP13.5□□□□□ -0.25
CLPX-203ENST00000558958 GNG5P63218 68 aa13.5□□□□□ -0.25
CLPX-203ENST00000558958 ARL6IP6Q8N6S5 226 aa13.5□□□□□ -0.25
CLPX-203ENST00000558958 CSN1S1P47710 185 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 NDUFA5Q16718 116 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 BEAN1Q3B7T3 259 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 HIST1H2BAQ96A08 127 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 SORL1Q92673 2214 aa13.49□□□□□ -0.25
CLPX-203ENST00000558958 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 DIRC3C9JPN6 131 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 F6UZH7 168 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 TCRAP04437 139 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 SRP19P09132 144 aaKnown RBP13.48□□□□□ -0.25
CLPX-203ENST00000558958 PSMG4Q5JS54 123 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 ZNF738Q8NE65 137 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 C11orf52Q96A22 123 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 RPUSD4Q96CM3 377 aaKnown RBP13.48□□□□□ -0.25
CLPX-203ENST00000558958 TREM1Q9NP99 234 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 PRAC2D3DTV9 90 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 TMEM250H0YL14 139 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 PEX7O00628 323 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 PRB4P10163 310 aaPredicted RBP13.48□□□□□ -0.25
CLPX-203ENST00000558958 OXLD1Q5BKU9 147 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 ATG101Q9BSB4 218 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 RPH3ALQ9UNE2 315 aa13.48□□□□□ -0.25
CLPX-203ENST00000558958 DNHD1Q96M86 4753 aa13.47□□□□□ -0.25
CLPX-203ENST00000558958 SLC35B3Q9H1N7 401 aa13.47□□□□□ -0.25
CLPX-203ENST00000558958 MAP6D1Q9H9H5 199 aa13.47□□□□□ -0.25
CLPX-203ENST00000558958 DEFB131AP59861 70 aa13.46□□□□□ -0.25
CLPX-203ENST00000558958 ODF3L2Q3SX64 289 aa13.46□□□□□ -0.25
CLPX-203ENST00000558958 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.25
CLPX-203ENST00000558958 CYB561D1Q8N8Q1 229 aa13.46□□□□□ -0.25
CLPX-203ENST00000558958 C2CD4CQ8TF44 421 aa13.46□□□□□ -0.25
CLPX-203ENST00000558958 SERTM2A0A1B0GWG4 89 aa13.45□□□□□ -0.26
CLPX-203ENST00000558958 DEFB1P60022 68 aa13.45□□□□□ -0.26
CLPX-203ENST00000558958 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
CLPX-203ENST00000558958 IGKV2-40A0A087WW87 121 aaPredicted RBP13.44□□□□□ -0.26
CLPX-203ENST00000558958 IGKV2D-40P01614 121 aaPredicted RBP13.44□□□□□ -0.26
CLPX-203ENST00000558958 CD7P09564 240 aa13.44□□□□□ -0.26
CLPX-203ENST00000558958 CMC4P56277 68 aaPredicted RBP13.44□□□□□ -0.26
CLPX-203ENST00000558958 LINC00479Q96M42 142 aa13.44□□□□□ -0.26
CLPX-203ENST00000558958 CITED4Q96RK1 184 aa13.44□□□□□ -0.26
CLPX-203ENST00000558958 DERL1Q9BUN8 251 aa13.44□□□□□ -0.26
CLPX-203ENST00000558958 RBAKDNA6NC62 111 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 F6UB75 175 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 K7EQM0 130 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 AKR1C3P42330 323 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 CEBPGP53567 150 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 OR8A1Q8NGG7 326 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 C19orf73Q9NVV2 129 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 KLF12Q9Y4X4 402 aa13.43□□□□□ -0.26
CLPX-203ENST00000558958 TRAV34A0A0B4J273 112 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 OR11H12B2RN74 326 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 IGLV2-11P01706 119 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 SFTA3P0C7M3 94 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
CLPX-203ENST00000558958 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
CLPX-203ENST00000558958 RPL35P42766 123 aaKnown RBP13.42□□□□□ -0.26
CLPX-203ENST00000558958 CNN1P51911 297 aaKnown RBP13.42□□□□□ -0.26
CLPX-203ENST00000558958 EGFEM1PQ0D2K5 195 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 FOXI2Q6ZQN5 318 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 TMEM75Q8N9X5 138 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 VGLL1Q99990 258 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 SAV1Q9H4B6 383 aaPredicted RBP13.42□□□□□ -0.26
CLPX-203ENST00000558958 DNAH3Q8TD57 4116 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 TRAV8-1A0A0A6YYK1 113 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 A0A0J9YX75 114 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 ERCC8Q13216 396 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 TMEM183BQ1AE95 376 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 SAMD5Q5TGI4 173 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 GDF5OSQ5U4N7 250 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 APRG1Q8IVJ8 170 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 OR10J6PQ8NGY7 276 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 SGK494Q96LW2 274 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 PARLQ9H300 379 aa13.42□□□□□ -0.26
CLPX-203ENST00000558958 G3V4G9 280 aa13.41□□□□□ -0.26
CLPX-203ENST00000558958 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
CLPX-203ENST00000558958 ZNF124Q15973 351 aa13.41□□□□□ -0.26
CLPX-203ENST00000558958 SOHLH1Q5JUK2 328 aa13.41□□□□□ -0.26
CLPX-203ENST00000558958 EBLN2Q6P2I7 272 aa13.41□□□□□ -0.26
CLPX-203ENST00000558958 GTSCR1Q86UQ5 136 aa13.41□□□□□ -0.26
CLPX-203ENST00000558958 FMC1Q96HJ9 113 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms