RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PAGE4O60829 102 aa11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 HYPMO75409 117 aa11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 CLRN3Q8NCR9 226 aa11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 ZNF503Q96F45 646 aa11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
CDC42BPB-203ENST00000558867 GNG7O60262 68 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 PSG1P11464 419 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 ADMP35318 185 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 PNRC1Q12796 327 aaPredicted RBP11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 TIGITQ495A1 244 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 ATRAIDQ6UW56 229 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 OR51G1Q8NGK1 321 aa11.78□□□□□ -0.52
CDC42BPB-203ENST00000558867 IGHV3-21A0A0B4J1V1 117 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 A0A1W2PRE2 83 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 C11orf94C9JXX5 98 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 NDUFA4O00483 81 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 NANOS2P60321 138 aaKnown RBP11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 RHEBQ15382 184 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 LINC00336Q6ZUF6 198 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 C20orf24Q9BUV8 137 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 RNF24Q9Y225 148 aa11.77□□□□□ -0.53
CDC42BPB-203ENST00000558867 FAM74A7A6NL05 159 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 K7EMT4 169 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 LINC00305Q7Z4B0 112 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 IQCF2Q8IXL9 164 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 HIGD1AQ9Y241 93 aa11.76□□□□□ -0.53
CDC42BPB-203ENST00000558867 KIAA1109Q2LD37 5005 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 OR2T8A6NH00 312 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 B4DEV8 164 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 H3BQ15 152 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 OR7C2O60412 319 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 SCO1O75880 301 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 CTSGP08311 255 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 S100A7P31151 101 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 Q8WTZ3 238 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 TVP23CQ96ET8 276 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 OR51M1Q9H341 326 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 RYR1P21817 5038 aa11.75□□□□□ -0.53
CDC42BPB-203ENST00000558867 A0A087WWC5 75 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 IGLL5B9A064 214 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 H3BRN7 92 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 ORM2P19652 201 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 PAFAH1B2P68402 229 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 Q56UQ5 140 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 SLC25A39Q9BZJ4 359 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 DOK5Q9P104 306 aa11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 YTHDF2Q9Y5A9 579 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-203ENST00000558867 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 ATP5G3P48201 142 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 LYZP61626 148 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 ZNF600Q6ZNG1 722 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 FXYD5Q96DB9 178 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 SHANK2-AS3Q9BTD1 123 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 PARLQ9H300 379 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 SDF2L1Q9HCN8 221 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 NAT8Q9UHE5 227 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 VPS13DQ5THJ4 4388 aa11.73□□□□□ -0.53
CDC42BPB-203ENST00000558867 ZNF727A8MUV8 499 aa11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 NUPL2O15504 423 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 UBE2G2P60604 165 aa11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 RELQ04864 619 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 RPUSD4Q96CM3 377 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 SMIM7Q9BQ49 75 aa11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
CDC42BPB-203ENST00000558867 TRAV5A0A0B4J249 113 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 IL4P05112 153 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 MED14OSP0DP75 135 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 NPPCP23582 126 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 BTN1A1Q13410 526 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 APLNQ9ULZ1 77 aa11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 PUS1Q9Y606 427 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDC42BPB-203ENST00000558867 M0R036 132 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 CA1P00915 261 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 TFPI2P48307 235 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 CEBPGP53567 150 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 CHRDL1Q9BU40 450 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
CDC42BPB-203ENST00000558867 SMCO4Q9NRQ5 59 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms