RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 A8MWV9 139 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 H3BRN7 92 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 SH2D1AO60880 128 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 LYZL6O75951 148 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 GAGE7O76087 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 GAGE12FP0CL80 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 GAGE12GP0CL81 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 GAGE12IP0CL82 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 CD40P25942 277 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 UBE2D1P51668 147 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 GAGE4Q13068 117 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 SRSF8Q9BRL6 282 aaKnown RBP12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 RNF7Q9UBF6 113 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 DNAH14Q0VDD8 3507 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 DOCK7Q96N67 2140 aa12.75□□□□□ -0.37
HMBOX1-212ENST00000558662 TNFRSF6BO95407 300 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 LYZP61626 148 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 MAPKAPK5-AS1Q8N8E1 139 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 H7C1H1 209 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 GAFA1Q96PS6 74 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 TTTY13Q9BZ97 58 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 FSCN3Q9NQT6 498 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
HMBOX1-212ENST00000558662 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 TRAV40A0A0B4J280 105 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 PRSS29PA6NIE9 313 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 RPL27AP46776 148 aaKnown RBP12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 UFC1Q9Y3C8 167 aa12.73□□□□□ -0.37
HMBOX1-212ENST00000558662 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-212ENST00000558662 F8VRH5 84 aa12.72□□□□□ -0.37
HMBOX1-212ENST00000558662 K7EMI3 77 aa12.72□□□□□ -0.37
HMBOX1-212ENST00000558662 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
HMBOX1-212ENST00000558662 KNTC1P50748 2209 aa12.72□□□□□ -0.37
HMBOX1-212ENST00000558662 IGLV2-18A0A075B6J9 118 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 H3BTX0 84 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 K7ESF4 209 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 RBP4P02753 201 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 WT1P19544 449 aaPredicted RBP12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 FXYD7P58549 80 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 LAGE3Q14657 143 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 C3orf36Q3SXR2 165 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 AGRNO00468 2067 aa12.71□□□□□ -0.37
HMBOX1-212ENST00000558662 IGHV3-48P01763 117 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 SLC25A16P16260 332 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 GAGE2BQ13066 116 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 FHL3Q13643 280 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 GAGE2EQ4V326 116 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 LINC01600Q96MT4 127 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 GAGE2DQ9UEU5 116 aa12.71□□□□□ -0.38
HMBOX1-212ENST00000558662 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 B5MCH6 92 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 DSCAMO60469 2012 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 GATA3P23771 443 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 PRR30Q53SZ7 412 aaPredicted RBP12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 C10orf55Q5SWW7 151 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 HES3Q5TGS1 186 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 TEX36Q5VZQ5 186 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 MDS2Q8NDY4 140 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 SPANXDQ9BXN6 97 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 HES7Q9BYE0 225 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 DNAJC13O75165 2243 aa12.7□□□□□ -0.38
HMBOX1-212ENST00000558662 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 PSMB2P49721 201 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 NDUFV3P56181 108 aaKnown RBP12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 MRPL23Q16540 153 aaKnown RBP12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 FZR1Q9UM11 496 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 IGHV1-18A0A0C4DH31 117 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 SMKR1H3BMG3 65 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 SNCGO76070 127 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 FBXL15Q9H469 300 aa12.69□□□□□ -0.38
HMBOX1-212ENST00000558662 NHLRC4P0CG21 123 aaPredicted RBP12.68□□□□□ -0.38
HMBOX1-212ENST00000558662 IFITM1P13164 125 aa12.68□□□□□ -0.38
HMBOX1-212ENST00000558662 RPL32P62910 135 aaKnown RBP12.68□□□□□ -0.38
HMBOX1-212ENST00000558662 PRR25Q96S07 402 aa12.68□□□□□ -0.38
HMBOX1-212ENST00000558662 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 SCGB1C2P0DMR2 95 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 MRGPRG-AS1Q2M3A8 158 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 TTC32Q5I0X7 151 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 SPRR3Q9UBC9 169 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 PRR14LQ5THK1 2151 aa12.67□□□□□ -0.38
HMBOX1-212ENST00000558662 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 LINC01549A6NIU2 74 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 GLRXP35754 106 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 TMEM78Q5T7P6 136 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 HCP5Q6MZN7 132 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 IL17RELQ6ZVW7 336 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 PROCRQ9UNN8 238 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 TNFRSF18Q9Y5U5 241 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms