RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 SUN5Q8TC36 379 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 C20orf173Q96LM9 149 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-234ENST00000557703 SH3BGRL3Q9H299 93 aa10.04□□□□□ -0.8
SHMT2-234ENST00000557703 CSN1S1P47710 185 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 FAM122CQ6P4D5 195 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 RNF182Q8N6D2 247 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 OR4B1Q8NGF8 309 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 ZNF503Q96F45 646 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 LINC00477Q96M19 166 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 OVOL2Q9BRP0 275 aa10.03□□□□□ -0.8
SHMT2-234ENST00000557703 DNAH9Q9NYC9 4486 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 TRBV7-9A0A0J9YWB2 115 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 RBAKDNA6NC62 111 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 SLC17A3O00476 420 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 SLC25A5P05141 298 aaKnown RBP10.02□□□□□ -0.81
SHMT2-234ENST00000557703 TSPOP30536 169 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 CNN1P51911 297 aaKnown RBP10.02□□□□□ -0.81
SHMT2-234ENST00000557703 BLNKQ8WV28 456 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 OTORQ9NRC9 128 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 PPP1R14DQ9NXH3 145 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 RFNGQ9Y644 331 aa10.02□□□□□ -0.81
SHMT2-234ENST00000557703 SERTM2A0A1B0GWG4 89 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 SMIM9A6NGZ8 99 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 NMBP08949 121 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-234ENST00000557703 OR10J4P0C629 311 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 ARL14EPLP0DKL9 152 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 DEFB135Q30KP9 77 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 GDF5OSQ5U4N7 250 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 IL17DQ8TAD2 202 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 WWC2-AS2Q96NR7 200 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 NEU1Q99519 415 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 ARL2-SNX15V9GYD0 113 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 TENM3Q9P273 2699 aa10.01□□□□□ -0.81
SHMT2-234ENST00000557703 A0A1B0GVG6 124 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 A0A1W2PRE2 83 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 ZNF705EA8MWA4 302 aaPredicted RBP10□□□□□ -0.81
SHMT2-234ENST00000557703 MIFP14174 115 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 GCHFRP30047 84 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 RANP62826 216 aaKnown RBP10□□□□□ -0.81
SHMT2-234ENST00000557703 HIST1H1AQ02539 215 aaPredicted RBP10□□□□□ -0.81
SHMT2-234ENST00000557703 ICAM4Q14773 271 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 IGFL4Q6B9Z1 124 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 AMTNQ6UX39 209 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 CSNK1G2-AS1Q8NCQ2 148 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 PHYHIPLQ96FC7 376 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 RARRES2Q99969 163 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 C20orf144Q9BQM9 153 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 Q9H3A6 140 aa10□□□□□ -0.81
SHMT2-234ENST00000557703 FBLL1A6NHQ2 334 aaKnown RBP9.99□□□□□ -0.81
SHMT2-234ENST00000557703 NPIPB6E9PJ23 425 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 F6UB75 175 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 TEX46H3BTG2 121 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 CDKN1BP46527 198 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 PPT1P50897 306 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 C9orf47Q6ZRZ4 202 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 TMEM256Q8N2U0 113 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 CMTM2Q8TAZ6 248 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 TMED6Q8WW62 240 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 IGF2BP2-AS1Q96M15 143 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 TCEAL7Q9BRU2 100 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 LENEPQ9Y5L5 61 aa9.99□□□□□ -0.81
SHMT2-234ENST00000557703 ZNF705FA8MVS1 300 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-234ENST00000557703 H3BTX0 84 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 BOLA2-SMG1P6H3BVE0 249 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 SNRPCP09234 159 aaKnown RBP9.98□□□□□ -0.81
SHMT2-234ENST00000557703 HLA-DMBP28068 263 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 EXOC3-AS1Q8N2X6 119 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 XCL2Q9UBD3 114 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 GOLT1BQ9Y3E0 138 aa9.98□□□□□ -0.81
SHMT2-234ENST00000557703 TMEM189A5PLL7 270 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 PGPA6NDG6 321 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 K7EQM0 130 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 M0R3E3 92 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 LEPP41159 167 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 FHITP49789 147 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 TMEM78Q5T7P6 136 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 ZNF705AQ6ZN79 300 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-234ENST00000557703 C5orf17Q8NAS9 161 aa9.97□□□□□ -0.81
SHMT2-234ENST00000557703 C11orf68Q9H3H3 251 aaKnown RBP9.97□□□□□ -0.81
SHMT2-234ENST00000557703 TRAV1-1A0A0B4J248 108 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 MAP1LC3B2A6NCE7 125 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 DIRC3C9JPN6 131 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 INSP01308 110 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 IGKV3-20P01619 116 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 H2AFB1P0C5Y9 115 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF705DP0CH99 300 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF705BP0CI00 300 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-234ENST00000557703 SULT1A2P50226 295 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 ZNF726P1Q15940 193 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 MAP1LC3BQ9GZQ8 125 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.82
SHMT2-234ENST00000557703 EDA2RQ9HAV5 297 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms