RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	SMIM29	Q86T20	159 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	IQCF2	Q8IXL9	164 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	C10orf67	Q8IYJ2	551 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	HSD17B11	Q8NBQ5	300 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	OR8A1	Q8NGG7	326 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	TMEM37	Q8WXS4	190 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	MRGPRF	Q96AM1	343 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	ST6GAL2	Q96JF0	529 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	GPR82	Q96P67	336 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	PDCD10	Q9BUL8	212 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	PBDC1	Q9BVG4	233 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	FUT9	Q9Y231	359 aa		3.04	□□□□□ -1.92
SCFD1-223	ENST00000557076	LPA	P08519	4548 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	TRAV18	A0A075B6X5	111 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076		A0A0A6YYH2	397 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	RNF222	A6NCQ9	220 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	RBFOX3	A6NFN3	312 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076		A6NJ64	397 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076		K7EQD1	137 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	ATG12	O94817	140 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	CFD	P00746	253 aa	Predicted RBP	3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	IGKV1-5	P01602	117 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	FABP1	P07148	127 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	KRTAP10-8	P60410	259 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	SEC61B	P60468	96 aa	Known RBP	3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	ARL16	Q0P5N6	197 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	WFDC2	Q14508	124 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	LINC01620	Q4KN68	170 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	PHLDA2	Q53GA4	152 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	SH2D6	Q7Z4S9	175 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	FAM219A	Q8IW50	185 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	DHRSX	Q8N5I4	330 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076		Q8N976	141 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	ZNF738	Q8NE65	137 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	OR1B1	Q8NGR6	318 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	PPP1R14B	Q96C90	147 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	PYGO2	Q9BRQ0	406 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	DPH3P1	Q9H4G8	78 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	EHF	Q9NZC4	300 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	CACNG5	Q9UF02	275 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	FSIP2	Q5CZC0	6907 aa		3.03	□□□□□ -1.92
SCFD1-223	ENST00000557076	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	IGKV1D-37	A0A075B6S9	117 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	TRGV1	A0A0A0MS02	117 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076		A0A0D9SG52	128 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	PRAC2	D3DTV9	90 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	SPINK4	O60575	86 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	CIB2	O75838	187 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	ATP5H	O75947	161 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	ORM1	P02763	201 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	VPREB1	P12018	145 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	CXCL3	P19876	107 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	SRI	P30626	198 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	S100A7	P31151	101 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	GPX4	P36969	197 aa	Predicted RBP	3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	ATP5I	P56385	69 aa	Predicted RBP	3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	LYZ	P61626	148 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	HIST1H1A	Q02539	215 aa	Predicted RBP	3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	ZNF90	Q03938	601 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	MLLT11	Q13015	90 aa	Predicted RBP	3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	LAGE3	Q14657	143 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	STEAP1B	Q6NZ63	245 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	RNF182	Q8N6D2	247 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	C11orf72	Q8NBR9	251 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	BLNK	Q8WV28	456 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	IL22RA2	Q969J5	263 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	ACY3	Q96HD9	319 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	TRGV9	Q99603	122 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	TXNDC17	Q9BRA2	123 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	AUNIP	Q9H7T9	357 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	GSN-AS1	Q9NRJ2	163 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	CRCT1	Q9UGL9	99 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	CACFD1	Q9UGQ2	172 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076		U3KQ87	197 aa		3.02	□□□□□ -1.93
SCFD1-223	ENST00000557076	TRAV8-3	A0A0A6YYJ7	113 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	TRDV1	A0A1B0GX56	115 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	ZFP92	A6NM28	416 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	FAM25E	A8MYX2	175 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076		E5RGE8	158 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	PMP2	P02689	132 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	GNAO1	P09471	354 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	MYL9	P24844	172 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	TAS2R46	P59540	309 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	RND3	P61587	244 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	SNRPE	P62304	92 aa	Known RBP	3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	NMS	Q5H8A3	153 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	ZNF680	Q8NEM1	530 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	OR52I2	Q8NH67	350 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	ZNF431	Q8TF32	576 aa	Predicted RBP	3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	RPUSD4	Q96CM3	377 aa	Known RBP	3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	MGLL	Q99685	303 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	VGLL1	Q99990	258 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076		Q9HAA7	133 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	RHBDL2	Q9NX52	303 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	RABL2A	Q9UBK7	228 aa	Predicted RBP	3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	ANAPC10	Q9UM13	185 aa		3.01	□□□□□ -1.93
SCFD1-223	ENST00000557076	TMEM56-RWDD3	S4R434	201 aa		3.01	□□□□□ -1.93

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