RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 C17orf58Q2M2W7 97 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 CT45A1Q5HYN5 189 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 FAM71F2Q6NXP2 309 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 UNQ5815/PRO19632Q6UWF5 114 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 SLC25A48Q6ZT89 311 aaKnown RBP3.67□□□□□ -1.82
ATXN3-246ENST00000557030 PDPNQ86YL7 162 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 FDCSPQ8NFU4 85 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 OR2Z1Q8NG97 314 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 OR4F17Q8NGA8 305 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 OR10X1Q8NGY0 326 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 CT45A3Q8NHU0 189 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 FAM167A-AS1Q96KT0 104 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 GPR82Q96P67 336 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 SLC25A2Q9BXI2 301 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
ATXN3-246ENST00000557030 NGBQ9NPG2 151 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF71Q9NQZ8 489 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF355PQ9NSJ1 428 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
ATXN3-246ENST00000557030 KLF12Q9Y4X4 402 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF407Q9C0G0 2248 aa3.67□□□□□ -1.82
ATXN3-246ENST00000557030 SHANK1Q9Y566 2161 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 IGKV1OR2-108A0A075B7D4 117 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 IGHV1-18A0A0C4DH31 117 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 TRBV6-1A0A0K0K1D8 114 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 hADV38S2A0JD32 116 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 PCNX2A6NKB5 2137 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 SYS1-DBNDD2H3BUS1 97 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 CHEK1O14757 476 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 CD5LO43866 347 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 CEACAM4O75871 244 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 LEPROTL1O95214 131 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 LHBP01229 141 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 TFF1P04155 84 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 SLC25A5P05141 298 aaKnown RBP3.66□□□□□ -1.82
ATXN3-246ENST00000557030 MYCNOSP40205 109 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 RPL8P62917 257 aaKnown RBP3.66□□□□□ -1.82
ATXN3-246ENST00000557030 SEC11AP67812 179 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 MEF2CQ06413 473 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-246ENST00000557030 PSMG4Q5JS54 123 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 LCN12Q6JVE5 192 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 EBLN2Q6P2I7 272 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 ZNF833PQ6ZTB9 187 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 BHLHA15Q7RTS1 189 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-246ENST00000557030 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 LYG1Q8N1E2 194 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 DEFB125Q8N687 156 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 CNEP1R1Q8N9A8 125 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 C5orf17Q8NAS9 161 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 OR9G1Q8NH87 305 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 TMEM167AQ8TBQ9 72 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 TMEM186Q96B77 213 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 FXYD5Q96DB9 178 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 NDFIP1Q9BT67 221 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 NDUFA4L2Q9NRX3 87 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 RPUSD1Q9UJJ7 312 aaKnown RBP3.66□□□□□ -1.82
ATXN3-246ENST00000557030 EPDR1Q9UM22 224 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 RNF24Q9Y225 148 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 PYGO1Q9Y3Y4 419 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 PPIAL4AQ9Y536 164 aa3.66□□□□□ -1.82
ATXN3-246ENST00000557030 LOC105371242A0A075B767 164 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 IGHV3OR15-7A0A075B7D8 119 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 A0A087X002 238 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 LOC102724200A0A096LPH7 203 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 IGHV4-61A0A0C4DH41 118 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 A6NDN8 102 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 TAX1BP3O14907 124 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 CA1P00915 261 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 LTAP01374 205 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 IGHV4-59P01825 116 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 SAA1P0DJI8 122 aaPredicted RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 CT45A6P0DMU7 189 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 CT45A5P0DMU8 189 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 CT45A7P0DMV0 189 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 GLRXP35754 106 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 CSN1S1P47710 185 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 PAX2Q02962 417 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 RIGQ13278 110 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 DEFB109BQ30KR1 87 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 VMA21Q3ZAQ7 101 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 BVES-AS1Q5T3Y7 98 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 GDF5OSQ5U4N7 250 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 Q6AWC8 147 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 GTF2H5Q6ZYL4 71 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 SSX8Q7RTT4 187 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 SPATA12Q7Z6I5 190 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 BPIFA4PQ86YQ2 179 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 ZCCHC24Q8N2G6 241 aaKnown RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 LINC00311Q8N616 119 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 C8orf31Q8N9H6 132 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 OR4C13Q8NGP0 309 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 OR1N2Q8NGR9 330 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 OR2T6Q8NHC8 308 aa3.65□□□□□ -1.83
ATXN3-246ENST00000557030 H1FXQ92522 213 aaKnown RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 FLYWCH2Q96CP2 140 aaKnown RBP3.65□□□□□ -1.83
ATXN3-246ENST00000557030 TRGV9Q99603 122 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms