RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PSMB3P49720 205 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 TAS2R45P59539 299 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 SPATA31B1PQ5VZV4 182 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 CEMP1Q6PRD7 247 aaPredicted RBP7.49□□□□□ -1.21
SHMT2-224ENST00000556737 LINC00305Q7Z4B0 112 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 S100A7AQ86SG5 101 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 RPP25LQ8N5L8 163 aaKnown RBP7.49□□□□□ -1.21
SHMT2-224ENST00000556737 LINC00476Q8WZB0 136 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 RAB24Q969Q5 203 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 UHRF2Q96PU4 802 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 FUT9Q9Y231 359 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 HLA-DRB4X5D2U9 266 aa7.49□□□□□ -1.21
SHMT2-224ENST00000556737 IGHV4-28A0A0C4DH34 117 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 OR7C2O60412 319 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
SHMT2-224ENST00000556737 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 S100A7P31151 101 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
SHMT2-224ENST00000556737 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
SHMT2-224ENST00000556737 ZNF726P1Q15940 193 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 MIR17HGQ75NE6 70 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 SSX7Q7RTT5 188 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 SCRT1Q9BWW7 348 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 MRPL32Q9BYC8 188 aaKnown RBP7.48□□□□□ -1.21
SHMT2-224ENST00000556737 SAV1Q9H4B6 383 aaPredicted RBP7.48□□□□□ -1.21
SHMT2-224ENST00000556737 CLEC5AQ9NY25 188 aa7.48□□□□□ -1.21
SHMT2-224ENST00000556737 FRAS1Q86XX4 4008 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 ZNF98A6NK75 572 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 ISLRO14498 428 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 IFNA1P01562 189 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 ARL14EPLP0DKL9 152 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 PLP1P60201 277 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 PATE2Q6UY27 113 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 FOXI2Q6ZQN5 318 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 COMMD7Q86VX2 200 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 OR8I2Q8N0Y5 310 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 PHLDA1Q8WV24 401 aaPredicted RBP7.47□□□□□ -1.21
SHMT2-224ENST00000556737 TMEM37Q8WXS4 190 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 SHANK2-AS3Q9BTD1 123 aa7.47□□□□□ -1.21
SHMT2-224ENST00000556737 TRAV5A0A0B4J249 113 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 A8MTW9 85 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 F6UB75 175 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 CXorf1O96002 111 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 MIFP14174 115 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 MEOX2P50222 304 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 UBE2L3P68036 154 aaKnown RBP7.46□□□□□ -1.22
SHMT2-224ENST00000556737 NDUFA5Q16718 116 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 C11orf45Q8TAV5 145 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 MBD3L1Q8WWY6 194 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 LINC00052Q96N35 136 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.22
SHMT2-224ENST00000556737 GNG13Q9P2W3 67 aa7.46□□□□□ -1.22
SHMT2-224ENST00000556737 DNAH10Q8IVF4 4471 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 TRAV8-2A0A0B4J237 113 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 A0A0J9YX75 114 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 IGKV3-20P01619 116 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 OR10J4P0C629 311 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 STAG3L2P0CL84 134 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 STAG3L3P0CL85 134 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 ID1P41134 155 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 GALR1P47211 349 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 SAMD13Q5VXD3 122 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 MORN5Q5VZ52 161 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 ZNF705AQ6ZN79 300 aaPredicted RBP7.45□□□□□ -1.22
SHMT2-224ENST00000556737 GPR82Q96P67 336 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 PAXXQ9BUH6 204 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 EIF5A2Q9GZV4 153 aaKnown RBP7.45□□□□□ -1.22
SHMT2-224ENST00000556737 TMPRSS5Q9H3S3 457 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 CELA1Q9UNI1 258 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 RNF24Q9Y225 148 aa7.45□□□□□ -1.22
SHMT2-224ENST00000556737 ZNF705FA8MVS1 300 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 SNRPCP09234 159 aaKnown RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 ZNF705DP0CH99 300 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 ZNF705BP0CI00 300 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 PYYP10082 97 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 GCHFRP30047 84 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 UBE2G2P60604 165 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 NUTF2P61970 127 aaKnown RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 CCL20P78556 96 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 TOR2AQ5JU69 321 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 AMTNQ6UX39 209 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 PQLC2Q6ZP29 291 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 BPIFA4PQ86YQ2 179 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 SLC7A5P1Q8MH63 180 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 BLNKQ8WV28 456 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 C16orf92Q96LL3 132 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 C1QTNF4Q9BXJ3 329 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 SLC35B3Q9H1N7 401 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 OR51M1Q9H341 326 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 TREM1Q9NP99 234 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 TMEM167BQ9NRX6 74 aa7.44□□□□□ -1.22
SHMT2-224ENST00000556737 KLK5Q9Y337 293 aaPredicted RBP7.44□□□□□ -1.22
SHMT2-224ENST00000556737 A0A087X0K7 114 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms