RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 CSN1S1P47710 185 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 TFPI2P48307 235 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 DEFB131AP59861 70 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 CD81P60033 236 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 RANP62826 216 aaKnown RBP8.36□□□□□ -1.07
FOXN3-212ENST00000556541 CCL20P78556 96 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 ICAM4Q14773 271 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 PSMG4Q5JS54 123 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 WFDC3Q8IUB2 231 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 HIST1H2BAQ96A08 127 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 C20orf173Q96LM9 149 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 ODF3Q96PU9 254 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 SAV1Q9H4B6 383 aaPredicted RBP8.36□□□□□ -1.07
FOXN3-212ENST00000556541 YTHDF2Q9Y5A9 579 aaKnown RBP8.36□□□□□ -1.07
FOXN3-212ENST00000556541 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
FOXN3-212ENST00000556541 A0A0J9YX75 114 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 PGPA6NDG6 321 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 F6UZH7 168 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 PAGE4O60829 102 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 CD7P09564 240 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-212ENST00000556541 ZNF506Q5JVG8 444 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 C9orf47Q6ZRZ4 202 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 IQCF2Q8IXL9 164 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 ZNF738Q8NE65 137 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 CMTM2Q8TAZ6 248 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 RPUSD4Q96CM3 377 aaKnown RBP8.35□□□□□ -1.07
FOXN3-212ENST00000556541 FAM210AQ96ND0 272 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 VAX2Q9UIW0 290 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 LENEPQ9Y5L5 61 aa8.35□□□□□ -1.07
FOXN3-212ENST00000556541 TRBV6-1A0A0K0K1D8 114 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 LOC102723971A0A1B0GUV8 181 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 DIRC3C9JPN6 131 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 H3BTX0 84 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 PDE6DO43924 150 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 TCRAP04437 139 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 S100A9P06702 114 aaKnown RBP8.34□□□□□ -1.07
FOXN3-212ENST00000556541 SUMO1P63165 101 aaKnown RBP8.34□□□□□ -1.07
FOXN3-212ENST00000556541 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 RNF182Q8N6D2 247 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 LINC00477Q96M19 166 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 LINC00052Q96N35 136 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 ATG101Q9BSB4 218 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 GNG13Q9P2W3 67 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 EPDR1Q9UM22 224 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 KLF12Q9Y4X4 402 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 SELENOKQ9Y6D0 94 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
FOXN3-212ENST00000556541 TGP01266 2768 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 KIR2DL5BA0A0G2JN68 375 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 KIR2DL5BA0A0G2JPC4 375 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 RAB19A4D1S5 217 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 C11orf94C9JXX5 98 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 TMEM250H0YL14 139 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 H3BMM0 161 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 K7EQM0 130 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 M0R3E3 92 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 HLA-DMBP28068 263 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 LINC00322Q6ZN03 302 aaPredicted RBP8.33□□□□□ -1.08
FOXN3-212ENST00000556541 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
FOXN3-212ENST00000556541 KIR2DL5AQ8N109 375 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 CYB561D1Q8N8Q1 229 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 TMEM75Q8N9X5 138 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 OR10J6PQ8NGY7 276 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 KIR2DL5BQ8NHK3 375 aa8.33□□□□□ -1.08
FOXN3-212ENST00000556541 NOTCH1P46531 2555 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 AMBPP02760 352 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 SNRPCP09234 159 aaKnown RBP8.32□□□□□ -1.08
FOXN3-212ENST00000556541 UBE2G2P60604 165 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 CST9LP1Q5W188 147 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 IGFL4Q6B9Z1 124 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 MORN3Q6PF18 240 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-212ENST00000556541 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 PRR25Q96S07 402 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 AURKAIP1Q9NWT8 199 aaPredicted RBP8.32□□□□□ -1.08
FOXN3-212ENST00000556541 AGRNO00468 2067 aa8.32□□□□□ -1.08
FOXN3-212ENST00000556541 A0A1B0GV50 99 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 ZNF705FA8MVS1 300 aaPredicted RBP8.31□□□□□ -1.08
FOXN3-212ENST00000556541 PEX7O00628 323 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 CRISP2P16562 243 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 ATP5G3P48201 142 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 COX8CQ7Z4L0 72 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 STHQ8IWL8 128 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 EIF4E3Q8N5X7 224 aaKnown RBP8.31□□□□□ -1.08
FOXN3-212ENST00000556541 SMIM12Q96EX1 92 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 FMC1Q96HJ9 113 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
FOXN3-212ENST00000556541 PRAC2D3DTV9 90 aa8.3□□□□□ -1.08
FOXN3-212ENST00000556541 UBE2CO00762 179 aa8.3□□□□□ -1.08
FOXN3-212ENST00000556541 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
FOXN3-212ENST00000556541 CNN1P51911 297 aaKnown RBP8.3□□□□□ -1.08
FOXN3-212ENST00000556541 NUTF2P61970 127 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms