RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 C8orf31Q8N9H6 132 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 STXBP6Q8NFX7 210 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OR1L8Q8NGR8 309 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OR5B3Q8NH48 314 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OR4A5Q8NH83 315 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 MRGPRDQ8TDS7 321 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 COQ2Q96H96 371 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 C20orf144Q9BQM9 153 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 MRPL32Q9BYC8 188 aaKnown RBP3.05□□□□□ -1.92
ATXN3-240ENST00000556339 COMMD5Q9GZQ3 224 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 SLC25A22Q9H936 323 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 OSTCQ9NRP0 149 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 TMEM14BQ9NUH8 114 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 PPP1R14DQ9NXH3 145 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 CALYQ9NYX4 217 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 TECRQ9NZ01 308 aaKnown RBP3.05□□□□□ -1.92
ATXN3-240ENST00000556339 GNG12Q9UBI6 72 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 PSG11Q9UQ72 335 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 NBEAL2Q6ZNJ1 2754 aa3.05□□□□□ -1.92
ATXN3-240ENST00000556339 KMT2CQ8NEZ4 4911 aaKnown RBP3.04□□□□□ -1.92
ATXN3-240ENST00000556339 IGLV5-37A0A075B6J1 123 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 IGHV3-43A0A0B4J1X8 118 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 KIR2DL5BA0A0G2JN68 375 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 KIR2DL5BA0A0G2JPC4 375 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 LY6LH3BQJ8 138 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 CCL24O00175 119 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 ISLRO14498 428 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 FCGR3BO75015 233 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 NDUFB4O95168 129 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 IGLV1-47P01700 117 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 IGHV3-43DP0DP04 118 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 NPPCP23582 126 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 NPY1RP25929 384 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 GCHFRP30047 84 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 SUB1P53999 127 aaKnown RBP eCLIP3.04□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF90Q03938 601 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF816Q0VGE8 651 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-240ENST00000556339 GAGE1Q13065 139 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 C17orf58Q2M2W7 97 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 RPEL1Q2QD12 228 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 TIGITQ495A1 244 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 TCTEX1D4Q5JR98 221 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 FAM78BQ5VT40 261 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 CST9LP1Q5W188 147 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 FAM231DQ6ZW35 169 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 TCF23Q7RTU1 214 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 KIR2DL5AQ8N109 375 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF664Q8N3J9 261 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 SLC24A4Q8NFF2 622 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 OR13A1Q8NGR1 328 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 VSTM2AQ8TAG5 236 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 UBALD1Q8TB05 177 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 GATAD1Q8WUU5 269 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 TMEM37Q8WXS4 190 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 MS4A10Q96PG2 267 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 DUX3Q96PT4 197 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 MGST2Q99735 147 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 ASCL2Q99929 193 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 GGTLC1Q9BX51 225 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 BET1LQ9NYM9 111 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 NAGKQ9UJ70 344 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 FUT9Q9Y231 359 aa3.04□□□□□ -1.92
ATXN3-240ENST00000556339 IGHV1-3A0A0C4DH29 117 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 A0A1W2PN81 502 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 HELTA6NFD8 242 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 ZNF705GA8MUZ8 300 aaPredicted RBP3.03□□□□□ -1.92
ATXN3-240ENST00000556339 PRAC2D3DTV9 90 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 M0R1X1 148 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 UPK2O00526 184 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 MOSP00540 346 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 HLA-DQA1P01909 254 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 OR9G9P0C7N8 305 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 ARL14EPLP0DKL9 152 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 CRISP2P16562 243 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 CHRNA7P36544 502 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 PCP4P48539 62 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 GNG4P50150 75 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 NUTF2P61970 127 aaKnown RBP3.03□□□□□ -1.92
ATXN3-240ENST00000556339 CX3CL1P78423 397 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
ATXN3-240ENST00000556339 PRCDQ00LT1 54 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 PLGLAQ15195 96 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 TMEM183BQ1AE95 376 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 C9orf66Q5T8R8 295 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 ETFRF1Q6IPR1 90 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 C19orf35Q6ZS72 473 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 C5orf24Q7Z6I8 188 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 TGIF2LXQ8IUE1 241 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 LINC00311Q8N616 119 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 C5orf56Q8N8D9 126 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 NECAP1Q8NC96 275 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 OR4B1Q8NGF8 309 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 OR1L4Q8NGR5 311 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 OCC1Q8TAD7 63 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 CMTM2Q8TAZ6 248 aa3.03□□□□□ -1.92
ATXN3-240ENST00000556339 C5orf30Q96GV9 206 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms