RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 BUB3O43684 328 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 IFNA5P01569 189 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 LINC00869P0C866 280 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 GALR1P47211 349 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 CAMLGP49069 296 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 SULT1A1P50225 295 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 APOC4P55056 127 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 FXYD7P58549 80 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 SNRPD3P62318 126 aaKnown RBP3.43□□□□□ -1.86
ATXN3-238ENST00000556288 SELENOTP62341 195 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 FCN2Q15485 313 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 ATP6V1FQ16864 119 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 DEFB135Q30KP9 77 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 C10orf113Q5VZT2 155 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 MIC13Q5XKP0 118 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 S100A7AQ86SG5 101 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 FAM24BQ8N5W8 94 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 TMEM252Q8N6L7 170 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 THAP8Q8NA92 274 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 OR4B1Q8NGF8 309 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 OR5C1Q8NGR4 320 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 PPP1R1CQ8WVI7 109 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF414Q96IQ9 312 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 UHRF2Q96PU4 802 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 SCRT1Q9BWW7 348 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 DNAJC4Q9NNZ3 241 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 NBEAL2Q6ZNJ1 2754 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 COL7A1Q02388 2944 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 IGHV3OR16-12A0A075B7B8 117 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 TRAV5A0A0B4J249 113 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 IFITM10A6NMD0 228 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 PRAC2D3DTV9 90 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 PRSS46E5RG02 174 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 H3BTX0 84 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 K7EQG2 157 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 MPC2O95563 127 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-238ENST00000556288 IFNA7P01567 189 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 PET100P0DJ07 73 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 CXCL3P19876 107 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
ATXN3-238ENST00000556288 H2BFSP57053 126 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 DEFB1P60022 68 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 RHOBP62745 196 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
ATXN3-238ENST00000556288 ZFAND6Q6FIF0 208 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 EBLN2Q6P2I7 272 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 LINC00305Q7Z4B0 112 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 MGST2Q99735 147 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 RNF126Q9BV68 326 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 GGACTQ9BVM4 153 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 SLC25A39Q9BZJ4 359 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-238ENST00000556288 CSTL1Q9H114 145 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 NRN1Q9NPD7 142 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-238ENST00000556288 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 CLEC5AQ9NY25 188 aa3.42□□□□□ -1.86
ATXN3-238ENST00000556288 FXYD6-FXYD2A0A087WZ82 144 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 A8MZ25 164 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 UBE2CO00762 179 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 DEFB4AO15263 64 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF705DP0CH99 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF705BP0CI00 300 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-238ENST00000556288 RPL7P18124 248 aaKnown RBP3.41□□□□□ -1.86
ATXN3-238ENST00000556288 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-238ENST00000556288 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 B2MP61769 119 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 IL15RAQ13261 267 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 C1orf194Q5T5A4 169 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF546Q86UE3 836 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 RNF182Q8N6D2 247 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 INO80EQ8NBZ0 244 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF738Q8NE65 137 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 OR11H7Q8NGC8 314 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 BLNKQ8WV28 456 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 RARRES2Q99969 163 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 SLC39A9Q9NUM3 307 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 XCL2Q9UBD3 114 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 TIMM9Q9Y5J7 89 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 PXMP4Q9Y6I8 212 aa3.41□□□□□ -1.86
ATXN3-238ENST00000556288 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
ATXN3-238ENST00000556288 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
ATXN3-238ENST00000556288 ZNF705FA8MVS1 300 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-238ENST00000556288 F6UB75 175 aa3.4□□□□□ -1.87
ATXN3-238ENST00000556288 SMLR1H3BR10 107 aa3.4□□□□□ -1.87
ATXN3-238ENST00000556288 MPDU1O75352 247 aa3.4□□□□□ -1.87
ATXN3-238ENST00000556288 HTN1P15515 57 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms