RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 BLNKQ8WV28 456 aa9.86□□□□□ -0.83
SHMT2-219ENST00000555563 AQP10Q96PS8 301 aa9.86□□□□□ -0.83
SHMT2-219ENST00000555563 FUT9Q9Y231 359 aa9.86□□□□□ -0.83
SHMT2-219ENST00000555563 RFNGQ9Y644 331 aa9.86□□□□□ -0.83
SHMT2-219ENST00000555563 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
SHMT2-219ENST00000555563 M0R3E3 92 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 HBE1P02100 147 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 EMP1P54849 157 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 PDE6HQ13956 83 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 Q6ZTC4 211 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 OR10J6PQ8NGY7 276 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 TMEM208Q9BTX3 173 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 PPP1R14DQ9NXH3 145 aa9.85□□□□□ -0.83
SHMT2-219ENST00000555563 LYSTQ99698 3801 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 LOC102723971A0A1B0GUV8 181 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 TMEM189A5PLL7 270 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 OR10J4P0C629 311 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 ZNF767PQ75MW2 155 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 EXOC3-AS1Q8N2X6 119 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 FXYD5Q96DB9 178 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 MRPL53Q96EL3 112 aaKnown RBP9.84□□□□□ -0.83
SHMT2-219ENST00000555563 PAXXQ9BUH6 204 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 OR51M1Q9H341 326 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 TIMM9Q9Y5J7 89 aa9.84□□□□□ -0.83
SHMT2-219ENST00000555563 FXYD6-FXYD2A0A087WZ82 144 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 NPIPB6E9PJ23 425 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 OR7C2O60412 319 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 CDKN1BP46527 198 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 ZNF266Q14584 549 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 C12orf74Q32Q52 190 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 RPP25LQ8N5L8 163 aaKnown RBP9.83□□□□□ -0.84
SHMT2-219ENST00000555563 OR2T35Q8NGX2 323 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 LINC00476Q8WZB0 136 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 ZNF503Q96F45 646 aa9.83□□□□□ -0.84
SHMT2-219ENST00000555563 RNF222A6NCQ9 220 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 ZNF705GA8MUZ8 300 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-219ENST00000555563 C11orf94C9JXX5 98 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 G3V3Q6 166 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 EIF3GO75821 320 aaKnown RBP eCLIP9.82□□□□□ -0.84
SHMT2-219ENST00000555563 PRM2P04554 102 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 NBEAP1P0C6P0 100 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 RAB2AP61019 212 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 UBE2L3P68036 154 aaKnown RBP9.82□□□□□ -0.84
SHMT2-219ENST00000555563 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 HSD17B11Q8NBQ5 300 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 C2CD4CQ8TF44 421 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 RNF141Q8WVD5 230 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 PHYHIPLQ96FC7 376 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 AAMDCQ9H7C9 122 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 PRELID1Q9Y255 219 aa9.82□□□□□ -0.84
SHMT2-219ENST00000555563 YTHDF2Q9Y5A9 579 aaKnown RBP9.82□□□□□ -0.84
SHMT2-219ENST00000555563 TRAV10A0A0B4J240 114 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 M6PRP20645 277 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 TAS2R45P59539 299 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 ICAM4Q14773 271 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 ACOT6Q3I5F7 207 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-219ENST00000555563 FAM222AQ5U5X8 452 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 INO80EQ8NBZ0 244 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-219ENST00000555563 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 TNFSF18Q9UNG2 199 aa9.81□□□□□ -0.84
SHMT2-219ENST00000555563 IGKV2-40A0A087WW87 121 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-219ENST00000555563 TEX48A0A1B0GUV7 120 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 LY6G6CO95867 125 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 IGKV2D-40P01614 121 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-219ENST00000555563 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 TSPOP30536 169 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 ERCC8Q13216 396 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 GFI1BQ5VTD9 330 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 TMEM256Q8N2U0 113 aa9.8□□□□□ -0.84
SHMT2-219ENST00000555563 HYDINQ4G0P3 5121 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 IGLL5B9A064 214 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 J3KRW8 73 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 ATP6V0CP27449 155 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 LEPP41159 167 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 TAS2R60P59551 318 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 LINC01587Q99440 93 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 PSMG3Q9BT73 122 aaPredicted RBP9.79□□□□□ -0.84
SHMT2-219ENST00000555563 SH3BGRL3Q9H299 93 aa9.79□□□□□ -0.84
SHMT2-219ENST00000555563 DEFB131BA0A096LNP1 70 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 A0A1W2PPV4 95 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 PLAC8L1A1L4L8 177 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 SMLR1H3BR10 107 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 AZU1P20160 251 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 RPL7L1Q6DKI1 246 aaKnown RBP9.78□□□□□ -0.84
SHMT2-219ENST00000555563 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 C20orf144Q9BQM9 153 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 AGPAT4-IT1Q9H0P7 198 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 Q9H3A6 140 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 PLA2G2EQ9NZK7 142 aa9.78□□□□□ -0.84
SHMT2-219ENST00000555563 IGHV4-4A0A075B6R2 117 aa9.77□□□□□ -0.85
SHMT2-219ENST00000555563 H7BYZ3 331 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms