RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ACOT7LQ6ZUV0 252 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 LYZL2Q7Z4W2 148 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 TMEM229BQ8NBD8 167 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 ODF3Q96PU9 254 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 CHAC1Q9BUX1 264 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 MRPL32Q9BYC8 188 aaKnown RBP6.38□□□□□ -1.39
SCFD1-215ENST00000555259 SHPKQ9UHJ6 478 aa6.38□□□□□ -1.39
SCFD1-215ENST00000555259 IGHV3-38A0A0C4DH36 116 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 HPGDSO60760 199 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 IL5P05113 134 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 SNRPCP09234 159 aaKnown RBP6.37□□□□□ -1.39
SCFD1-215ENST00000555259 OR5G3P0C626 314 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 TAS2R19P59542 299 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 PLP1P60201 277 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 NEDD8Q15843 81 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 ANXA2RQ3ZCQ2 193 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 CYP2G1PQ6ZSU1 146 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 ZBTB8BQ8NAP8 495 aaPredicted RBP6.37□□□□□ -1.39
SCFD1-215ENST00000555259 SLC50A1Q9BRV3 221 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 VCX3BQ9H321 246 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 MRPL16Q9NX20 251 aaKnown RBP6.37□□□□□ -1.39
SCFD1-215ENST00000555259 GPR132Q9UNW8 380 aa6.37□□□□□ -1.39
SCFD1-215ENST00000555259 SLC25A5P05141 298 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 LINC00869P0C866 280 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 GYPEP15421 78 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 ANXA7P20073 488 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 LSM3P62310 102 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 IBA57Q5T440 356 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 EIF4E3Q8N5X7 224 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 CIRBP-AS1Q8TBR5 109 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 PCNPQ8WW12 178 aaKnown RBP6.36□□□□□ -1.39
SCFD1-215ENST00000555259 RAB26Q9ULW5 256 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 KCNIP3Q9Y2W7 256 aa6.36□□□□□ -1.39
SCFD1-215ENST00000555259 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-215ENST00000555259 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 C7orf71A4D174 169 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 SLC17A3O00476 420 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 PITX3O75364 302 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 ASIPP42127 132 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 HNRNPA3P51991 378 aaKnown RBP6.35□□□□□ -1.39
SCFD1-215ENST00000555259 LINC01559Q495D7 138 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 S100A7AQ86SG5 101 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 TXNDC17Q9BRA2 123 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 H3BTX0 84 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 ORM1P02763 201 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 RPP30P78346 268 aaKnown RBP6.35□□□□□ -1.39
SCFD1-215ENST00000555259 CD300CQ08708 224 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 PATE2Q6UY27 113 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 IQCF2Q8IXL9 164 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 ARV1Q9H2C2 271 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 TP53TG3Q9ULZ0 132 aa6.35□□□□□ -1.39
SCFD1-215ENST00000555259 KLLNB2CW77 178 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 FAM25AB3EWG3 89 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 FAM25CB3EWG5 89 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 FAM25GB3EWG6 89 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 ANKRD65E5RJM6 399 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 LECT2O14960 151 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 IGLV2-8P01709 118 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 SELENOTP62341 195 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 BTN1A1Q13410 526 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 ASAH1Q13510 395 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 ACOT6Q3I5F7 207 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-215ENST00000555259 BLNKQ8WV28 456 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 DAZAP1Q96EP5 407 aaKnown RBP6.34□□□□□ -1.39
SCFD1-215ENST00000555259 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 CIB3Q96Q77 187 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-215ENST00000555259 ARL6Q9H0F7 186 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
SCFD1-215ENST00000555259 SMCO3A2RU48 225 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 DISC1C4P0D8 188 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 WRBO00258 174 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 MPDU1O75352 247 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 MED6O75586 246 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 RPL37AP61513 92 aaKnown RBP6.33□□□□□ -1.4
SCFD1-215ENST00000555259 TDRG1Q3Y452 100 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 C4orf46Q504U0 113 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 SPANXN5Q5MJ07 72 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 MORN5Q5VZ52 161 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 SAT2Q96F10 170 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-215ENST00000555259 TM2D2Q9BX73 214 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 DNAJC4Q9NNZ3 241 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 EXTL2Q9UBQ6 330 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 PXMP4Q9Y6I8 212 aa6.33□□□□□ -1.4
SCFD1-215ENST00000555259 C9JCJ5 164 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 H3BP45 60 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 SYNGR2O43760 224 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 IGLC2P0DOY2 106 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 TNFSF8P32971 234 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 RNASE4P34096 147 aaKnown RBP6.32□□□□□ -1.4
SCFD1-215ENST00000555259 PPT1P50897 306 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 TIRAPP58753 221 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 SRPXP78539 464 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 LINC00305Q7Z4B0 112 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 BPIFA4PQ86YQ2 179 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 FAM19A4Q96LR4 140 aa6.32□□□□□ -1.4
SCFD1-215ENST00000555259 SLC25A31Q9H0C2 315 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms