RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 FRZBQ92765 325 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 C11orf52Q96A22 123 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 FLYWCH2Q96CP2 140 aaKnown RBP4.17□□□□□ -1.74
ATXN3-226ENST00000554350 FAM210BQ96KR6 192 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 C12orf57Q99622 126 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 RNF5Q99942 180 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 RASL11BQ9BPW5 248 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 GGTLC1Q9BX51 225 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 PARLQ9H300 379 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 ZNF355PQ9NSJ1 428 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 SLC35D1Q9NTN3 355 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 APLNQ9ULZ1 77 aa4.17□□□□□ -1.74
ATXN3-226ENST00000554350 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 C11orf94C9JXX5 98 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 BUB1B-PAK6H3BSN5 160 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 H7BYZ3 331 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 J3QR06 171 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 PHOX2AO14813 284 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 HMGB3O15347 200 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 SLC31A2O15432 143 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 PAGE4O60829 102 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 GGCTO75223 188 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 MMP23AO75900 390 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 YIF1AO95070 293 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 IGHV3-11P01762 117 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 LGALS1P09382 135 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 CD7P09564 240 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 IL3RAP26951 378 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 RPL35P42766 123 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 RAB9AP51151 201 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 AKR1D1P51857 326 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 SUB1P53999 127 aaKnown RBP eCLIP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 FGF8P55075 233 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 FAM3BP58499 235 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 B2MP61769 119 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 ERHP84090 104 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 DEFB135Q30KP9 77 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 PVRIGQ6DKI7 326 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 KCNIP4Q6PIL6 250 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 PQLC2Q6ZP29 291 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 ZFP82Q8N141 532 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 C11orf45Q8TAV5 145 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 RNASEH2CQ8TDP1 164 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 RPUSD4Q96CM3 377 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 ACY3Q96HD9 319 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 MGST2Q99735 147 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 SLC25A22Q9H936 323 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 TMEM167BQ9NRX6 74 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 MDFICQ9P1T7 246 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 OR51B2Q9Y5P1 312 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 PXMP4Q9Y6I8 212 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 DYNC1H1Q14204 4646 aaKnown RBP4.16□□□□□ -1.74
ATXN3-226ENST00000554350 FAT2Q9NYQ8 4349 aa4.16□□□□□ -1.74
ATXN3-226ENST00000554350 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
ATXN3-226ENST00000554350 LOC102724200A0A096LPH7 203 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 TEX50A0A1B0GTY4 177 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 A0A1W2PPI3 338 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 IFITM10A6NMD0 228 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 C9JCJ5 164 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 H0YJW9 148 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BKO60814 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 CA2P00918 260 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BJP06899 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 CXCL1P09341 107 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 PRB4P10163 310 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BOP23527 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BBP33778 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 PRRX1P54821 245 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BDP58876 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 TAS2R45P59539 299 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 SELENOTP62341 195 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BCP62807 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 RPL19P84098 196 aaKnown RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST2H2BEQ16778 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 LTC4SQ16873 150 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 ZNF674Q2M3X9 581 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HLA-DRB5Q30154 266 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 LGALS9BQ3B8N2 356 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 COX19Q49B96 90 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 PIK3CD-AS1Q5SR53 167 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 C1orf134Q5TEV5 83 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 LINC01551Q86U37 167 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 TGIF2LXQ8IUE1 241 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 POM121L12Q8N7R1 296 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 TEX45Q8NA69 505 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 OR9G1Q8NH87 305 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 MYOZ3Q8TDC0 251 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BHQ93079 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 UHRF2Q96PU4 802 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BNQ99877 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HIST1H2BMQ99879 126 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 HSPB9Q9BQS6 159 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 SRSF8Q9BRL6 282 aaKnown RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 MRPL32Q9BYC8 188 aaKnown RBP4.15□□□□□ -1.75
ATXN3-226ENST00000554350 OR51M1Q9H341 326 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 NDUFA4L2Q9NRX3 87 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 DNAH2Q9P225 4427 aa4.15□□□□□ -1.75
ATXN3-226ENST00000554350 TGIF2-C20orf24A0A0A6YYL0 155 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms