RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 RXFP4Q8TDU9 374 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 PCNPQ8WW12 178 aaKnown RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 RPUSD4Q96CM3 377 aaKnown RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 FAM167A-AS1Q96KT0 104 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 CITED2Q99967 270 aaPredicted RBP3.82□□□□□ -1.8
VTI1B-202ENST00000553619 SLC25A2Q9BXI2 301 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 TREM1Q9NP99 234 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 GNG13Q9P2W3 67 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 SMPXQ9UHP9 88 aa3.82□□□□□ -1.8
VTI1B-202ENST00000553619 F8P00451 2351 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 TRAV5A0A0B4J249 113 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 PGPA6NDG6 321 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 A8MWP6 167 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 KRBOX1C9JBD0 128 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 K7EQM0 130 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 DNASE2O00115 360 aaPredicted RBP3.81□□□□□ -1.8
VTI1B-202ENST00000553619 OVOL1O14753 267 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 CHEK1O14757 476 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 PAGE4O60829 102 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF253O75346 499 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 OR10J4P0C629 311 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 BCL2P10415 239 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 CBLN1P23435 193 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SYNJ2BPP57105 145 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 UBE2L3P68036 154 aaKnown RBP3.81□□□□□ -1.8
VTI1B-202ENST00000553619 HAGHQ16775 308 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 NSUN5P1Q3KNT7 163 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 AWAT1Q58HT5 328 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 TCTEX1D4Q5JR98 221 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF506Q5JVG8 444 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SPATA31B1PQ5VZV4 182 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SIGLEC15Q6ZMC9 328 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.81□□□□□ -1.8
VTI1B-202ENST00000553619 C11orf44Q8N8P7 122 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 OR9G4Q8NGQ1 327 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 CMTM2Q8TAZ6 248 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SLC50A1Q9BRV3 221 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 RHPN1-AS1Q9BWJ2 59 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SLC35B3Q9H1N7 401 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 SIGLEC8Q9NYZ4 499 aa3.81□□□□□ -1.8
VTI1B-202ENST00000553619 TRBV19A0A075B6N1 114 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 A0A087X0K7 114 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 TRAV25A0A0B4J276 109 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 LOC102723971A0A1B0GUV8 181 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 SERTM2A0A1B0GWG4 89 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 FBLL1A6NHQ2 334 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 C2orf70A6NJV1 201 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 FAM74A7A6NL05 159 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 C11orf94C9JXX5 98 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF207O43670 478 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 SLC25A5P05141 298 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 PYYP10082 97 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 INSL3P51460 131 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 RANP62826 216 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 CCL20P78556 96 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 MEF2BQ02080 365 aaPredicted RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 RNF212Q495C1 297 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 LEMD1Q68G75 181 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 UNQ9165/PRO28630Q6UXU0 137 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 RBPMS2Q6ZRY4 209 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 SSX7Q7RTT5 188 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 C3orf56Q8N813 242 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 OR2K2Q8NGT1 345 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 DYNLRB2Q8TF09 96 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 BLNKQ8WV28 456 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 DLX4Q92988 240 aaPredicted RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 HIST1H2BAQ96A08 127 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 ZNF414Q96IQ9 312 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 CITED1Q99966 193 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
VTI1B-202ENST00000553619 SCRT1Q9BWW7 348 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 OTORQ9NRC9 128 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 MLXQ9UH92 298 aa3.8□□□□□ -1.8
VTI1B-202ENST00000553619 FN1P02751 2386 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 C2CD3Q4AC94 2353 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 IGHV3OR16-8A0A075B7F1 116 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 TRAV2A0A0B4J234 112 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 TMEM218A2RU14 115 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 KRTAP29-1A8MX34 341 aaPredicted RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 MRPS12O15235 138 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 SRP19P09132 144 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 IGLC2P0DOY2 106 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 FOLR2P14207 255 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 GP9P14770 177 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 MALP21145 153 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 CNN1P51911 297 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 TAS2R60P59551 318 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 CD81P60033 236 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 UBE2G2P60604 165 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 SNRPD3P62318 126 aaKnown RBP3.79□□□□□ -1.8
VTI1B-202ENST00000553619 DEFA6Q01524 100 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 FHL3Q13643 280 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 DEFB136Q30KP8 78 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 SOHLH1Q5JUK2 328 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 MORN5Q5VZ52 161 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
VTI1B-202ENST00000553619 TCF24Q7RTU0 167 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms