RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 VSTM2AQ8TAG5 236 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 TYMSOSQ8TAI1 123 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 CMTM2Q8TAZ6 248 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 GEMIN6Q8WXD5 167 aaKnown RBP3.63□□□□□ -1.83
ATXN3-218ENST00000553309 DDIT4LQ96D03 193 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 SIGLEC8Q9NYZ4 499 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 IDI2-AS1Q9NZ38 188 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 IL36GQ9NZH8 169 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 OR5V1Q9UGF6 321 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 PCTPQ9UKL6 214 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF780BQ9Y6R6 833 aa3.63□□□□□ -1.83
ATXN3-218ENST00000553309 TRAV18A0A075B6X5 111 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 IGHV3-15A0A0B4J1V0 119 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 A0A0J9YW62 118 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 FAM220BPB1ANY3 271 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 TMEM250H0YL14 139 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 OR2H2O95918 312 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 HLA-DRB1P01911 266 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 TTRP02766 147 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 EIF4EP06730 217 aaKnown RBP3.62□□□□□ -1.83
ATXN3-218ENST00000553309 LINC00869P0C866 280 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 CRYBB3P26998 211 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 BLVRBP30043 206 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-218ENST00000553309 GRPRP30550 384 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 SLC25A1P53007 311 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 DEFB112Q30KQ8 113 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 NSUN5P1Q3KNT7 163 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 GGTA1PQ4G0N0 100 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 LY6G6FQ5SQ64 297 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF684Q5T5D7 378 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 REG3GQ6UW15 175 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 Q6ZRG5 221 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 STHQ8IWL8 128 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 LINC00471Q8N535 108 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF615Q8N8J6 731 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 OR10P1Q8NGE3 313 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 OR6K6Q8NGW6 343 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 ATP6V0E2Q8NHE4 81 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 AQP10Q96PS8 301 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 PMCHL2Q9BQD1 86 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 RTBDNQ9BSG5 229 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-218ENST00000553309 MRPL32Q9BYC8 188 aaKnown RBP3.62□□□□□ -1.83
ATXN3-218ENST00000553309 SRXN1Q9BYN0 137 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 OR2H1Q9GZK4 316 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 REEP1Q9H902 201 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 PRNDQ9UKY0 176 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 MED31Q9Y3C7 131 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 FIS1Q9Y3D6 152 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 OARD1Q9Y530 152 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 LINC00312Q9Y6C7 94 aa3.62□□□□□ -1.83
ATXN3-218ENST00000553309 PLECQ15149 4684 aaKnown RBP3.62□□□□□ -1.83
ATXN3-218ENST00000553309 TRAV9-2A0A087WT02 112 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 A0A0A6YYD5 115 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TRBV9A0A0B4J1U6 114 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 FAM231BA6NCW3 169 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TMEM262E9PQX1 116 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 C17orf112F2Z3M2 114 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TNFSF12O43508 249 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 ENSAO43768 121 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF253O75346 499 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF682O95780 498 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 PFN1P07737 140 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SRP19P09132 144 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SCTP09683 121 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF43P17038 809 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 IER3P46695 156 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 OR1E2P47887 323 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 REG1BP48304 166 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 UBE2MP61081 183 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 GNG5P63218 68 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 EWSR1Q01844 656 aaKnown RBP eCLIP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 KIAA0040Q15053 153 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 MSMO1Q15800 293 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TAL2Q16559 108 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TTC32Q5I0X7 151 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 MEIG1Q5JSS6 88 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 PAGE3Q5JUK9 113 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SPANXN4Q5MJ08 99 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SFXN4Q6P4A7 337 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 ZNF880Q6PDB4 577 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 LCN15Q6UWW0 184 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 BRD3OSQ6XYD6 125 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 WDR31Q8NA23 367 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 CSNK1G2-AS1Q8NCQ2 148 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 OR4C16Q8NGL9 310 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 OR4C13Q8NGP0 309 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 OR1L8Q8NGR8 309 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 PPP1R1CQ8WVI7 109 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 TMEM54Q969K7 222 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 S100A16Q96FQ6 103 aaKnown RBP3.61□□□□□ -1.83
ATXN3-218ENST00000553309 GPR21Q99679 349 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 MCHR1Q99705 422 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 RASL11BQ9BPW5 248 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 PRADC1Q9BSG0 188 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 SH3BGRL3Q9H299 93 aa3.61□□□□□ -1.83
ATXN3-218ENST00000553309 FGF20Q9NP95 211 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms