RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SRD5A3Q9H8P0 318 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 PPP1R14DQ9NXH3 145 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 RPH3ALQ9UNE2 315 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 TRBV19A0A075B6N1 114 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 RBMY1BA6NDE4 496 aaKnown RBP8.44□□□□□ -1.06
TMEM116-218ENST00000552839 RBMY1EA6NEQ0 496 aaKnown RBP8.44□□□□□ -1.06
TMEM116-218ENST00000552839 ZNF253O75346 499 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 IFNA1P01562 189 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 RBMY1DP0C7P1 496 aaKnown RBP8.44□□□□□ -1.06
TMEM116-218ENST00000552839 FHITP49789 147 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 PPT1P50897 306 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 RNF182Q8N6D2 247 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 FXYD5Q96DB9 178 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
TMEM116-218ENST00000552839 H3BQ15 152 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 SLC17A3O00476 420 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 MRPS12O15235 138 aaKnown RBP8.43□□□□□ -1.06
TMEM116-218ENST00000552839 UBE2G2P60604 165 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 RANP62826 216 aaKnown RBP8.43□□□□□ -1.06
TMEM116-218ENST00000552839 ODF3L2Q3SX64 289 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 ACTL10Q5JWF8 245 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 IGFL4Q6B9Z1 124 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 FAM24BQ8N5W8 94 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 DEFB125Q8N687 156 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 FAM110AQ9BQ89 295 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 ZNF331Q9NQX6 463 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-218ENST00000552839 PRELID1Q9Y255 219 aa8.43□□□□□ -1.06
TMEM116-218ENST00000552839 RAB14P61106 215 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 HIST1H1AQ02539 215 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-218ENST00000552839 ICAM4Q14773 271 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 PSG3Q16557 428 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 FOXI2Q6ZQN5 318 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 SSX7Q7RTT5 188 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 OR4B1Q8NGF8 309 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 OR10J6PQ8NGY7 276 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 LINC00476Q8WZB0 136 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 RPUSD4Q96CM3 377 aaKnown RBP8.42□□□□□ -1.06
TMEM116-218ENST00000552839 Q9H3A6 140 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 ALMS1Q8TCU4 4167 aa8.42□□□□□ -1.06
TMEM116-218ENST00000552839 FRAS1Q86XX4 4008 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 K7EQM0 130 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 SOCS3O14543 225 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
TMEM116-218ENST00000552839 SLC25A5P05141 298 aaKnown RBP8.41□□□□□ -1.06
TMEM116-218ENST00000552839 RPL35AP18077 110 aaKnown RBP8.41□□□□□ -1.06
TMEM116-218ENST00000552839 CST9LP1Q5W188 147 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-218ENST00000552839 LYPD1Q8N2G4 141 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 EXOC3-AS1Q8N2X6 119 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 RXFP4Q8TDU9 374 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
TMEM116-218ENST00000552839 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
TMEM116-218ENST00000552839 LOC102724200A0A096LPH7 203 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-218ENST00000552839 PGPA6NDG6 321 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 LY6G6CO95867 125 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 HLA-DMBP28068 263 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 APOC4P55056 127 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 NUTF2P61970 127 aaKnown RBP8.4□□□□□ -1.06
TMEM116-218ENST00000552839 TEX261Q6UWH6 196 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 MRPL53Q96EL3 112 aaKnown RBP8.4□□□□□ -1.06
TMEM116-218ENST00000552839 ZNF503Q96F45 646 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 C20orf173Q96LM9 149 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 NKX6-2Q9C056 277 aaPredicted RBP8.4□□□□□ -1.06
TMEM116-218ENST00000552839 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 MANBALQ9NQG1 85 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 GNG13Q9P2W3 67 aa8.4□□□□□ -1.06
TMEM116-218ENST00000552839 TRAV8-2A0A0B4J237 113 aa8.39□□□□□ -1.07
TMEM116-218ENST00000552839 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF124Q15973 351 aa8.39□□□□□ -1.07
TMEM116-218ENST00000552839 TMEM78Q5T7P6 136 aa8.39□□□□□ -1.07
TMEM116-218ENST00000552839 SAT2Q96F10 170 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-218ENST00000552839 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
TMEM116-218ENST00000552839 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
TMEM116-218ENST00000552839 A0A1W2PRE2 83 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF705FA8MVS1 300 aaPredicted RBP8.38□□□□□ -1.07
TMEM116-218ENST00000552839 F6UB75 175 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 F6UZH7 168 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 M0R3E3 92 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 NDUFB4O95168 129 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 SUMO1P63165 101 aaKnown RBP8.38□□□□□ -1.07
TMEM116-218ENST00000552839 C5orf17Q8NAS9 161 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF680Q8NEM1 530 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 OR8A1Q8NGG7 326 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 PLA2G2EQ9NZK7 142 aa8.38□□□□□ -1.07
TMEM116-218ENST00000552839 A0A0J9YX75 114 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 PAGE4O60829 102 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 CA1P00915 261 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-218ENST00000552839 PRB4P10163 310 aaPredicted RBP8.37□□□□□ -1.07
TMEM116-218ENST00000552839 TAGLN2P37802 199 aaKnown RBP8.37□□□□□ -1.07
TMEM116-218ENST00000552839 DEFB1P60022 68 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 GOLT1AQ6ZVE7 132 aa8.37□□□□□ -1.07
TMEM116-218ENST00000552839 ZNF767PQ75MW2 155 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms