RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TRGV9Q99603 122 aa7.07□□□□□ -1.28
SLC48A1-209ENST00000552003 Q9H8V8 135 aa7.07□□□□□ -1.28
SLC48A1-209ENST00000552003 XCL2Q9UBD3 114 aa7.07□□□□□ -1.28
SLC48A1-209ENST00000552003 IGKV1D-37A0A075B6S9 117 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 IGKV1OR2-108A0A075B7D4 117 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 IGHV3-66A0A0C4DH42 116 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF705FA8MVS1 300 aaPredicted RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 BOLA2-SMG1P6H3BVE0 249 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 TOMM40O96008 361 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 CFDP00746 253 aaPredicted RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 CAMLGP49069 296 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 LGALSLQ3ZCW2 172 aaPredicted RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 TIGITQ495A1 244 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF600Q6ZNG1 722 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 CYP2G1PQ6ZSU1 146 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 C15orf53Q8NAA6 179 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 BPIFCQ8NFQ6 507 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 MGST2Q99735 147 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 NPCDR1Q9BY65 106 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 WDR61Q9GZS3 305 aaKnown RBP7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 Q9H3A6 140 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 WFDC1Q9HC57 220 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
SLC48A1-209ENST00000552003 AGPAT2O15120 278 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 IGKV1-17P01599 117 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 DNAH10OSP0CZ25 163 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 RD3LP0DJH9 198 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 NKX2-5P52952 324 aaPredicted RBP7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 RPL7L1Q6DKI1 246 aaKnown RBP7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 Q8WTZ3 238 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 GNPNAT1Q96EK6 184 aaPredicted RBP7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 NEU1Q99519 415 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF471Q9BX82 626 aaPredicted RBP7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 VSIRQ9H7M9 311 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 TIMM9Q9Y5J7 89 aa7.05□□□□□ -1.28
SLC48A1-209ENST00000552003 K7EQG2 157 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 YIF1AO95070 293 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 PSG1P11464 419 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 TPT1P13693 172 aaKnown RBP7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 S100A7P31151 101 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 RPL29P47914 159 aaKnown RBP7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 LINC00315P59091 139 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF90Q03938 601 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 OPCMLQ14982 345 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 PXDC1Q5TGL8 231 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 SSX7Q7RTT5 188 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 SLC51BQ86UW2 128 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 HSD17B11Q8NBQ5 300 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 OR51G1Q8NGK1 321 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 STOML3Q8TAV4 291 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 GINS3Q9BRX5 216 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 PSMG3Q9BT73 122 aaPredicted RBP7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 CYTL1Q9NRR1 136 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 SLC45A2Q9UMX9 530 aa7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 PUS1Q9Y606 427 aaKnown RBP eCLIP7.04□□□□□ -1.28
SLC48A1-209ENST00000552003 TRAV2A0A0B4J234 112 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 DNASE2O00115 360 aaPredicted RBP7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 NUDT3O95989 172 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 IL4P05112 153 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF688P0C7X2 276 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 LINC00869P0C866 280 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 B2MP61769 119 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 PAFAH1B2P68402 229 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 Q6ZRG5 221 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 S100A7AQ86SG5 101 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 RNF125Q96EQ8 232 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 PFDN5Q99471 154 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 RSG1Q9BU20 258 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 ARV1Q9H2C2 271 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 ZNF586Q9NXT0 402 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 TNFRSF18Q9Y5U5 241 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 PXMP4Q9Y6I8 212 aa7.03□□□□□ -1.28
SLC48A1-209ENST00000552003 COX7A2P2O60397 106 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 HYPMO75409 117 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 ATP6V0CP27449 155 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 ASIPP42127 132 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 CCL18P55774 89 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 PLP1P60201 277 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 LYZP61626 148 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 SERF2P84101 59 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 USF2Q15853 346 aaPredicted RBP7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 MIC13Q5XKP0 118 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 EIF5AL1Q6IS14 154 aaKnown RBP7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 TOMM20LQ6UXN7 152 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 BAP18Q8IXM2 172 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 OR1L4Q8NGR5 311 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 OR2G3Q8NGZ4 309 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 DCANP1Q8TF63 244 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 NARS2Q96I59 477 aaKnown RBP7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 UHRF2Q96PU4 802 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 PBDC1Q9BVG4 233 aa7.02□□□□□ -1.29
SLC48A1-209ENST00000552003 SLC39A9Q9NUM3 307 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms