RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 LINC00467Q9BRT7 94 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 CACFD1Q9UGQ2 172 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 LY96Q9Y6Y9 160 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 SULT1A3P0DMM9 295 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 SULT1A4P0DMN0 295 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 SLC25A6P12236 298 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-222ENST00000551425 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-222ENST00000551425 GGNBP1Q5YKI7 109 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 CCDC28AQ8IWP9 274 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 ZNF738Q8NE65 137 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 OR8A1Q8NGG7 326 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 GPR82Q96P67 336 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 SLC25A22Q9H936 323 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 PPP1R14DQ9NXH3 145 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 CACNG5Q9UF02 275 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 SLC45A2Q9UMX9 530 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 ICOSQ9Y6W8 199 aa8.02□□□□□ -1.13
PTCH1-222ENST00000551425 C7orf66A4D0T2 115 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 SNURFLB1AK76 121 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 GPX4P36969 197 aaPredicted RBP8.01□□□□□ -1.13
PTCH1-222ENST00000551425 DAZ2Q13117 558 aaKnown RBP8.01□□□□□ -1.13
PTCH1-222ENST00000551425 OR2F1Q13607 317 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 SMCO1Q147U7 214 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 TRGV9Q99603 122 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 U3KQ87 197 aa8.01□□□□□ -1.13
PTCH1-222ENST00000551425 SSNA1O43805 119 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 CFDP00746 253 aaPredicted RBP8□□□□□ -1.13
PTCH1-222ENST00000551425 Q6ZTI0 123 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 Q8N814 137 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 OR1S1Q8NH92 325 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 SLC35E1Q96K37 410 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 ALG5Q9Y673 324 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 DNAH8Q96JB1 4490 aa8□□□□□ -1.13
PTCH1-222ENST00000551425 C5orf51A6NDU8 294 aa7.99□□□□□ -1.13
PTCH1-222ENST00000551425 FAM25EA8MYX2 175 aa7.99□□□□□ -1.13
PTCH1-222ENST00000551425 ZNF324O75467 553 aaPredicted RBP7.99□□□□□ -1.13
PTCH1-222ENST00000551425 EVI2AP22794 236 aa7.99□□□□□ -1.13
PTCH1-222ENST00000551425 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
PTCH1-222ENST00000551425 TRGV2A0A075B6R0 118 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 IGKV1OR2-108A0A075B7D4 117 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 PAX4O43316 350 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 PITX3O75364 302 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 CXCL3P19876 107 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 FGL1Q08830 312 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 PSG3Q16557 428 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 IAH1Q2TAA2 248 aaPredicted RBP7.98□□□□□ -1.13
PTCH1-222ENST00000551425 C2orf50Q96LR7 162 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 MED28Q9H204 178 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 GSKIPQ9P0R6 139 aa7.98□□□□□ -1.13
PTCH1-222ENST00000551425 CCSO14618 274 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 GOSR2O14653 212 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 PSCAO43653 123 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 MED6O75586 246 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 S100A7P31151 101 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 GFI1BQ5VTD9 330 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 WFDC10BQ8IUB3 73 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 C10orf126Q8N4M7 172 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 THAP8Q8NA92 274 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 ZBTB8BQ8NAP8 495 aaPredicted RBP7.97□□□□□ -1.13
PTCH1-222ENST00000551425 MGAT4CQ9UBM8 478 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 HSPB7Q9UBY9 170 aa7.97□□□□□ -1.13
PTCH1-222ENST00000551425 WRBO00258 174 aa7.96□□□□□ -1.14
PTCH1-222ENST00000551425 CYCSP99999 105 aaKnown RBP7.96□□□□□ -1.14
PTCH1-222ENST00000551425 ID3Q02535 119 aa7.96□□□□□ -1.14
PTCH1-222ENST00000551425 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
PTCH1-222ENST00000551425 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
PTCH1-222ENST00000551425 DTD1Q8TEA8 209 aa7.96□□□□□ -1.14
PTCH1-222ENST00000551425 RBKSQ9H477 322 aa7.96□□□□□ -1.14
PTCH1-222ENST00000551425 LRP2P98164 4655 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 SYNGR2O43760 224 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 CRYGDP07320 174 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 ORM2P19652 201 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 RRAS2P62070 204 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-222ENST00000551425 SLAQ13239 276 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 Q6ZNX1 250 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 RPUSD4Q96CM3 377 aaKnown RBP7.95□□□□□ -1.14
PTCH1-222ENST00000551425 CIB3Q96Q77 187 aaPredicted RBP7.95□□□□□ -1.14
PTCH1-222ENST00000551425 PYGO2Q9BRQ0 406 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 TMEM147Q9BVK8 224 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 NMES1Q9C002 83 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 FUT9Q9Y231 359 aa7.95□□□□□ -1.14
PTCH1-222ENST00000551425 A0A087X0K7 114 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 H3BRN7 92 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 SIX6O95475 246 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 SCGB1D2O95969 90 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 RPL7P18124 248 aaKnown RBP7.94□□□□□ -1.14
PTCH1-222ENST00000551425 CRYBA4P53673 196 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 RPP30P78346 268 aaKnown RBP7.94□□□□□ -1.14
PTCH1-222ENST00000551425 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 C11orf72Q8NBR9 251 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 BPIFCQ8NFQ6 507 aa7.94□□□□□ -1.14
PTCH1-222ENST00000551425 TRGV1A0A0A0MS02 117 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 TRAV5A0A0B4J249 113 aa7.93□□□□□ -1.14
PTCH1-222ENST00000551425 MBPP02686 304 aaPredicted RBP7.93□□□□□ -1.14
PTCH1-222ENST00000551425 PRB4P10163 310 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms