RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
RAB5B-205ENST00000549034 PPP1R14DQ9NXH3 145 aa7.04□□□□□ -1.28
RAB5B-205ENST00000549034 CLEC5AQ9NY25 188 aa7.04□□□□□ -1.28
RAB5B-205ENST00000549034 BCL2L11O43521 198 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 NDUFB4O95168 129 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 RANP62826 216 aaKnown RBP7.03□□□□□ -1.28
RAB5B-205ENST00000549034 EIF5AP63241 154 aaKnown RBP7.03□□□□□ -1.28
RAB5B-205ENST00000549034 HIST1H1AQ02539 215 aaPredicted RBP7.03□□□□□ -1.28
RAB5B-205ENST00000549034 CD300CQ08708 224 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 ICAM4Q14773 271 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 TMEM41BQ5BJD5 291 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 AKR1C8PQ5T2L2 129 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 EXOC3-AS1Q8N2X6 119 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 RPP25LQ8N5L8 163 aaKnown RBP7.03□□□□□ -1.28
RAB5B-205ENST00000549034 OR8A1Q8NGG7 326 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 RAB24Q969Q5 203 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 ZNF503Q96F45 646 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 AAMDCQ9H7C9 122 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 XCL2Q9UBD3 114 aa7.03□□□□□ -1.28
RAB5B-205ENST00000549034 PRAC2D3DTV9 90 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 ZNF253O75346 499 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 CNN1P51911 297 aaKnown RBP7.02□□□□□ -1.29
RAB5B-205ENST00000549034 UBE2L3P68036 154 aaKnown RBP7.02□□□□□ -1.29
RAB5B-205ENST00000549034 PDE6HQ13956 83 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 PQLC2Q6ZP29 291 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 OR10J6PQ8NGY7 276 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 RARRES2Q99969 163 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 C1QTNF4Q9BXJ3 329 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 SLC35B3Q9H1N7 401 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 PRELID1Q9Y255 219 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 TP53TG1Q9Y2A0 90 aa7.02□□□□□ -1.29
RAB5B-205ENST00000549034 GIG44P09565 113 aaPredicted RBP7.01□□□□□ -1.29
RAB5B-205ENST00000549034 SEC11BP0C7V7 166 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 STAG3L2P0CL84 134 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 STAG3L3P0CL85 134 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 TPT1P13693 172 aaKnown RBP7.01□□□□□ -1.29
RAB5B-205ENST00000549034 C4BPBP20851 252 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 ZFP69Q49AA0 526 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 BAP18Q8IXM2 172 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 OR11H2Q8NH07 326 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 CLUHP3Q96NS8 147 aa7.01□□□□□ -1.29
RAB5B-205ENST00000549034 PRKDCP78527 4128 aaKnown RBP7.01□□□□□ -1.29
RAB5B-205ENST00000549034 PGPA6NDG6 321 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 M0R3E3 92 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 CXorf1O96002 111 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 ARL14EPLP0DKL9 152 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 CSN1S1P47710 185 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 ERCC8Q13216 396 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 IQCF2Q8IXL9 164 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 LYPD1Q8N2G4 141 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 PHYHIPLQ96FC7 376 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 Q9H3A6 140 aa7□□□□□ -1.29
RAB5B-205ENST00000549034 IGHV3OR16-12A0A075B7B8 117 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 CTXND1A0A1B0GTU2 59 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 GCHFRP30047 84 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 FGF8P55075 233 aaPredicted RBP6.99□□□□□ -1.29
RAB5B-205ENST00000549034 ZNF726P1Q15940 193 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 SPINK13Q1W4C9 94 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 FAM74A1Q5RGS3 127 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 AMTNQ6UX39 209 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 SSX7Q7RTT5 188 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 CMTM2Q8TAZ6 248 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 RXFP4Q8TDU9 374 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 MRPL53Q96EL3 112 aaKnown RBP6.99□□□□□ -1.29
RAB5B-205ENST00000549034 LINC00477Q96M19 166 aa6.99□□□□□ -1.29
RAB5B-205ENST00000549034 TRAV12-2A0A075B6T6 113 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 A0A0J9YWU9 116 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 A8MTW9 85 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 UMAD1C9J7I0 102 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 M0R2Z0 102 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 AMBPP02760 352 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 CT45A10P0DMU9 189 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 EIF5AL1Q6IS14 154 aaKnown RBP6.98□□□□□ -1.29
RAB5B-205ENST00000549034 SLC51BQ86UW2 128 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 STOML3Q8TAV4 291 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 FAM213BQ8TBF2 198 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 TMED6Q8WW62 240 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 AGPAT4-IT1Q9H0P7 198 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 TMPRSS5Q9H3S3 457 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 OTORQ9NRC9 128 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 TMEM167BQ9NRX6 74 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 RPH3ALQ9UNE2 315 aa6.98□□□□□ -1.29
RAB5B-205ENST00000549034 IGKV2-40A0A087WW87 121 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-205ENST00000549034 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 BOLA2-SMG1P6H3BVE0 249 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 J3KRW8 73 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 DEFB4AO15263 64 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 IGKV2D-40P01614 121 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-205ENST00000549034 SLC25A5P05141 298 aaKnown RBP6.97□□□□□ -1.29
RAB5B-205ENST00000549034 TSPOP30536 169 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 CDKN1BP46527 198 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 FHITP49789 147 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 NKX2-5P52952 324 aaPredicted RBP6.97□□□□□ -1.29
RAB5B-205ENST00000549034 SUMO1P63165 101 aaKnown RBP6.97□□□□□ -1.29
RAB5B-205ENST00000549034 C1orf158Q8N1D5 194 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 C9orf62Q8N4C0 152 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 SUN5Q8TC36 379 aa6.97□□□□□ -1.29
RAB5B-205ENST00000549034 SFT2D1Q8WV19 159 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms