RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 PRR31Q5SQ13 230 aa21.55■■□□□ 1.04
BRF1-213ENST00000548421 MRPL53Q96EL3 112 aaKnown RBP21.55■■□□□ 1.04
BRF1-213ENST00000548421 NOTCH3Q9UM47 2321 aa21.55■■□□□ 1.04
BRF1-213ENST00000548421 F6UZH7 168 aa21.54■■□□□ 1.04
BRF1-213ENST00000548421 NDUFS6O75380 124 aaKnown RBP21.54■■□□□ 1.04
BRF1-213ENST00000548421 PSG3Q16557 428 aa21.54■■□□□ 1.04
BRF1-213ENST00000548421 FAM24BQ8N5W8 94 aa21.54■■□□□ 1.04
BRF1-213ENST00000548421 TREM1Q9NP99 234 aa21.54■■□□□ 1.04
BRF1-213ENST00000548421 EPDR1Q9UM22 224 aa21.54■■□□□ 1.04
BRF1-213ENST00000548421 ZNF256Q9Y2P7 627 aaPredicted RBP21.54■■□□□ 1.04
BRF1-213ENST00000548421 CSN1S1P47710 185 aa21.53■■□□□ 1.04
BRF1-213ENST00000548421 C20orf173Q96LM9 149 aa21.53■■□□□ 1.04
BRF1-213ENST00000548421 LINC00052Q96N35 136 aa21.53■■□□□ 1.04
BRF1-213ENST00000548421 GPR61Q9BZJ8 451 aa21.53■■□□□ 1.04
BRF1-213ENST00000548421 ZNF688P0C7X2 276 aa21.52■■□□□ 1.04
BRF1-213ENST00000548421 GNG5P63218 68 aa21.52■■□□□ 1.04
BRF1-213ENST00000548421 ARL6IP6Q8N6S5 226 aa21.52■■□□□ 1.04
BRF1-213ENST00000548421 PKD1L1Q8TDX9 2849 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 SCO2A0A1W2PP80 73 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 WIPF1O43516 503 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 SRP19P09132 144 aaKnown RBP21.52■■□□□ 1.03
BRF1-213ENST00000548421 SLC7A5P1Q8MH63 180 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 HIST1H2BAQ96A08 127 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 RPH3ALQ9UNE2 315 aa21.52■■□□□ 1.03
BRF1-213ENST00000548421 DNHD1Q96M86 4753 aa21.51■■□□□ 1.03
BRF1-213ENST00000548421 ZNF705FA8MVS1 300 aaPredicted RBP21.51■■□□□ 1.03
BRF1-213ENST00000548421 C9JQL5 133 aa21.51■■□□□ 1.03
BRF1-213ENST00000548421 TMEM250H0YL14 139 aa21.51■■□□□ 1.03
BRF1-213ENST00000548421 ZNF738Q8NE65 137 aa21.51■■□□□ 1.03
BRF1-213ENST00000548421 C11orf52Q96A22 123 aa21.51■■□□□ 1.03
BRF1-213ENST00000548421 PEX7O00628 323 aa21.5■■□□□ 1.03
BRF1-213ENST00000548421 TCRAP04437 139 aa21.5■■□□□ 1.03
BRF1-213ENST00000548421 PSMG4Q5JS54 123 aa21.5■■□□□ 1.03
BRF1-213ENST00000548421 ATG101Q9BSB4 218 aa21.5■■□□□ 1.03
BRF1-213ENST00000548421 DIRC3C9JPN6 131 aa21.49■■□□□ 1.03
BRF1-213ENST00000548421 RPUSD4Q96CM3 377 aaKnown RBP21.49■■□□□ 1.03
BRF1-213ENST00000548421 SLC35B3Q9H1N7 401 aa21.49■■□□□ 1.03
BRF1-213ENST00000548421 SORL1Q92673 2214 aa21.49■■□□□ 1.03
BRF1-213ENST00000548421 CYB561D1Q8N8Q1 229 aa21.48■■□□□ 1.03
BRF1-213ENST00000548421 BEAN1Q3B7T3 259 aa21.47■■□□□ 1.03
BRF1-213ENST00000548421 CITED4Q96RK1 184 aa21.47■■□□□ 1.03
BRF1-213ENST00000548421 SERTM2A0A1B0GWG4 89 aa21.46■■□□□ 1.03
BRF1-213ENST00000548421 CEBPGP53567 150 aa21.46■■□□□ 1.03
BRF1-213ENST00000548421 GOLT1AQ6ZVE7 132 aa21.46■■□□□ 1.03
BRF1-213ENST00000548421 PRAC2D3DTV9 90 aa21.45■■□□□ 1.03
BRF1-213ENST00000548421 PRB4P10163 310 aaPredicted RBP21.45■■□□□ 1.03
BRF1-213ENST00000548421 C2CD4CQ8TF44 421 aa21.45■■□□□ 1.03
BRF1-213ENST00000548421 MAP6D1Q9H9H5 199 aa21.45■■□□□ 1.03
BRF1-213ENST00000548421 K7EQM0 130 aa21.45■■□□□ 1.02
BRF1-213ENST00000548421 AKR1C3P42330 323 aa21.45■■□□□ 1.02
BRF1-213ENST00000548421 IGKV2-40A0A087WW87 121 aaPredicted RBP21.44■■□□□ 1.02
BRF1-213ENST00000548421 IGKV2D-40P01614 121 aaPredicted RBP21.44■■□□□ 1.02
BRF1-213ENST00000548421 SFTA3P0C7M3 94 aa21.44■■□□□ 1.02
BRF1-213ENST00000548421 DEFB131AP59861 70 aa21.44■■□□□ 1.02
BRF1-213ENST00000548421 CNN1P51911 297 aaKnown RBP21.43■■□□□ 1.02
BRF1-213ENST00000548421 CMC4P56277 68 aaPredicted RBP21.43■■□□□ 1.02
BRF1-213ENST00000548421 ODF3L2Q3SX64 289 aa21.43■■□□□ 1.02
BRF1-213ENST00000548421 RBAKDNA6NC62 111 aa21.42■■□□□ 1.02
BRF1-213ENST00000548421 OXLD1Q5BKU9 147 aa21.42■■□□□ 1.02
BRF1-213ENST00000548421 LINC00479Q96M42 142 aa21.42■■□□□ 1.02
BRF1-213ENST00000548421 DERL1Q9BUN8 251 aa21.42■■□□□ 1.02
BRF1-213ENST00000548421 PARLQ9H300 379 aa21.42■■□□□ 1.02
BRF1-213ENST00000548421 DEFB1P60022 68 aa21.41■■□□□ 1.02
BRF1-213ENST00000548421 TMEM75Q8N9X5 138 aa21.41■■□□□ 1.02
BRF1-213ENST00000548421 TMEM218A2RU14 115 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 OR11H12B2RN74 326 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 RPL35P42766 123 aaKnown RBP21.4■■□□□ 1.02
BRF1-213ENST00000548421 UBE2G1P62253 170 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 OR8A1Q8NGG7 326 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 OR10J6PQ8NGY7 276 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 FMC1Q96HJ9 113 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 FAM110AQ9BQ89 295 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 KLF12Q9Y4X4 402 aa21.4■■□□□ 1.02
BRF1-213ENST00000548421 TRAV34A0A0B4J273 112 aa21.39■■□□□ 1.02
BRF1-213ENST00000548421 F6UB75 175 aa21.39■■□□□ 1.02
BRF1-213ENST00000548421 CD7P09564 240 aa21.39■■□□□ 1.02
BRF1-213ENST00000548421 SOHLH1Q5JUK2 328 aa21.39■■□□□ 1.02
BRF1-213ENST00000548421 FOXI2Q6ZQN5 318 aa21.39■■□□□ 1.02
BRF1-213ENST00000548421 TRAV8-1A0A0A6YYK1 113 aa21.39■■□□□ 1.01
BRF1-213ENST00000548421 S100A9P06702 114 aaKnown RBP21.39■■□□□ 1.01
BRF1-213ENST00000548421 TMEM183BQ1AE95 376 aa21.39■■□□□ 1.01
BRF1-213ENST00000548421 ZNF674Q2M3X9 581 aa21.39■■□□□ 1.01
BRF1-213ENST00000548421 EBLN2Q6P2I7 272 aa21.39■■□□□ 1.01
BRF1-213ENST00000548421 VGLL1Q99990 258 aa21.39■■□□□ 1.01
BRF1-213ENST00000548421 SAV1Q9H4B6 383 aaPredicted RBP21.39■■□□□ 1.01
BRF1-213ENST00000548421 FBLL1A6NHQ2 334 aaKnown RBP21.38■■□□□ 1.01
BRF1-213ENST00000548421 HIST1H1AQ02539 215 aaPredicted RBP21.38■■□□□ 1.01
BRF1-213ENST00000548421 C9orf47Q6ZRZ4 202 aa21.38■■□□□ 1.01
BRF1-213ENST00000548421 GTSCR1Q86UQ5 136 aa21.38■■□□□ 1.01
BRF1-213ENST00000548421 SGK494Q96LW2 274 aa21.38■■□□□ 1.01
BRF1-213ENST00000548421 A0A0J9YX75 114 aa21.37■■□□□ 1.01
BRF1-213ENST00000548421 IGLV2-11P01706 119 aa21.37■■□□□ 1.01
BRF1-213ENST00000548421 ZNF705DP0CH99 300 aaPredicted RBP21.37■■□□□ 1.01
BRF1-213ENST00000548421 ZNF705BP0CI00 300 aaPredicted RBP21.37■■□□□ 1.01
BRF1-213ENST00000548421 TAS2R60P59551 318 aa21.37■■□□□ 1.01
BRF1-213ENST00000548421 GDF5OSQ5U4N7 250 aa21.37■■□□□ 1.01
BRF1-213ENST00000548421 SMIM7Q9BQ49 75 aa21.37■■□□□ 1.01
BRF1-213ENST00000548421 ZNF727A8MUV8 499 aa21.36■■□□□ 1.01
BRF1-213ENST00000548421 NPIPB6E9PJ23 425 aa21.36■■□□□ 1.01
BRF1-213ENST00000548421 FLI1Q01543 452 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms