RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PSG9Q00887 426 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 GUCA2BQ16661 112 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 ZNF674Q2M3X9 581 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 EPDR1Q9UM22 224 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 FOLR2P14207 255 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 INSL3P51460 131 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 EXOC3-AS1Q8N2X6 119 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 SVBPQ8N300 66 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 C5orf17Q8NAS9 161 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 SORL1Q92673 2214 aa13.09□□□□□ -0.31
HDAC7-227ENST00000548080 IZUMO1RA6ND01 250 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 HELTA6NFD8 242 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 K7EIL1 84 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 HIST1H2BAQ96A08 127 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 AAMDCQ9H7C9 122 aa13.08□□□□□ -0.32
HDAC7-227ENST00000548080 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
HDAC7-227ENST00000548080 PEX7O00628 323 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 CMTM2Q8TAZ6 248 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 DYNLRB2Q8TF09 96 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 C2CD4CQ8TF44 421 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 TVP23CQ96ET8 276 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
HDAC7-227ENST00000548080 ZNF331Q9NQX6 463 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-227ENST00000548080 SNAPINO95295 136 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 CBLN1P23435 193 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 AKR1C3P42330 323 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 GNG5P63218 68 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 TMEM241Q24JQ0 296 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 SLC50A1Q9BRV3 221 aa13.06□□□□□ -0.32
HDAC7-227ENST00000548080 ZNF256Q9Y2P7 627 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-227ENST00000548080 CD300EQ496F6 205 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-227ENST00000548080 TCF24Q7RTU0 167 aa13.05□□□□□ -0.32
HDAC7-227ENST00000548080 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
HDAC7-227ENST00000548080 MLXQ9UH92 298 aa13.05□□□□□ -0.32
HDAC7-227ENST00000548080 NAT8Q9UHE5 227 aa13.05□□□□□ -0.32
HDAC7-227ENST00000548080 RPH3ALQ9UNE2 315 aa13.05□□□□□ -0.32
HDAC7-227ENST00000548080 TCRAP04437 139 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 RPL35P42766 123 aaKnown RBP13.04□□□□□ -0.32
HDAC7-227ENST00000548080 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
HDAC7-227ENST00000548080 RPL11P62913 178 aaKnown RBP13.04□□□□□ -0.32
HDAC7-227ENST00000548080 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 CLRN3Q8NCR9 226 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 SDF2L1Q9HCN8 221 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 M0R036 132 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 CSN1S1P47710 185 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 DEFB114Q30KQ6 69 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 PRELID1Q9Y255 219 aa13.04□□□□□ -0.32
HDAC7-227ENST00000548080 M0R3E3 92 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
HDAC7-227ENST00000548080 TAS2R60P59551 318 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 PNRC1Q12796 327 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-227ENST00000548080 DEFB121Q5J5C9 76 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 NRN1Q9NPD7 142 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 CLEC5AQ9NY25 188 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 KLF12Q9Y4X4 402 aa13.03□□□□□ -0.32
HDAC7-227ENST00000548080 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 TRAV8-2A0A0B4J237 113 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 C9JCJ5 164 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 DIRC3C9JPN6 131 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 IGFL4Q6B9Z1 124 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 C16orf92Q96LL3 132 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 LINC00479Q96M42 142 aa13.02□□□□□ -0.33
HDAC7-227ENST00000548080 TRAV34A0A0B4J273 112 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 UBE2G1P62253 170 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
HDAC7-227ENST00000548080 TMEM183BQ1AE95 376 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 TMEM61Q8N0U2 210 aa13.01□□□□□ -0.33
HDAC7-227ENST00000548080 ZMAT5Q9UDW3 170 aaKnown RBP13.01□□□□□ -0.33
HDAC7-227ENST00000548080 IGKV3-7A0A075B6H7 116 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 SERTM2A0A1B0GWG4 89 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 K7EQM0 130 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 ISLRO14498 428 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 SOCS3O14543 225 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 GNG4P50150 75 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 ADIRFQ15847 76 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 CENPWQ5EE01 88 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 LCN12Q6JVE5 192 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 RNF182Q8N6D2 247 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 MRPL53Q96EL3 112 aaKnown RBP13□□□□□ -0.33
HDAC7-227ENST00000548080 FMC1Q96HJ9 113 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
HDAC7-227ENST00000548080 RHEBQ15382 184 aa12.99□□□□□ -0.33
HDAC7-227ENST00000548080 PSG3Q16557 428 aa12.99□□□□□ -0.33
HDAC7-227ENST00000548080 C7orf77A4D0Y5 90 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 ZNF705FA8MVS1 300 aaPredicted RBP12.98□□□□□ -0.33
HDAC7-227ENST00000548080 B4DEV8 164 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 SCO1O75880 301 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 LINC01551Q86U37 167 aa12.98□□□□□ -0.33
HDAC7-227ENST00000548080 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms