RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 H3BMM0 161 aa17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 FGF8P55075 233 aaPredicted RBP17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 ICAM4Q14773 271 aa17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 TRPT1Q86TN4 253 aaKnown RBP17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 SUN5Q8TC36 379 aa17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 MRPL53Q96EL3 112 aaKnown RBP17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 AGRNO00468 2067 aa17.08■□□□□ 0.32
SMARCD1-203ENST00000547247 ZNF705FA8MVS1 300 aaPredicted RBP17.07■□□□□ 0.32
SMARCD1-203ENST00000547247 SFT2D1Q8WV19 159 aa17.07■□□□□ 0.32
SMARCD1-203ENST00000547247 MBD3L1Q8WWY6 194 aa17.07■□□□□ 0.32
SMARCD1-203ENST00000547247 Q9H3A6 140 aa17.07■□□□□ 0.32
SMARCD1-203ENST00000547247 M0R3E3 92 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 H2AFB1P0C5Y9 115 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 APOC4P55056 127 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 KIR2DL5BA0A0G2JN68 375 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 KIR2DL5BA0A0G2JPC4 375 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 HAGHQ16775 308 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 ALKAL2Q6UX46 152 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 SBSPONQ8IVN8 264 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 KIR2DL5AQ8N109 375 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 OR8A1Q8NGG7 326 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 KIR2DL5BQ8NHK3 375 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
SMARCD1-203ENST00000547247 DUSP14O95147 198 aaKnown RBP17.05■□□□□ 0.32
SMARCD1-203ENST00000547247 FAM74A1Q5RGS3 127 aa17.05■□□□□ 0.32
SMARCD1-203ENST00000547247 OR4B1Q8NGF8 309 aa17.05■□□□□ 0.32
SMARCD1-203ENST00000547247 OTORQ9NRC9 128 aa17.05■□□□□ 0.32
SMARCD1-203ENST00000547247 ZNF705DP0CH99 300 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 ZNF705BP0CI00 300 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 PRB4P10163 310 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 CLUHP3Q96NS8 147 aa17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 ASCL2Q99929 193 aa17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 CSTL1Q9H114 145 aa17.04■□□□□ 0.32
SMARCD1-203ENST00000547247 PGPA6NDG6 321 aa17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 PRAC2D3DTV9 90 aa17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 IGKV3-20P01619 116 aa17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 CNN1P51911 297 aaKnown RBP17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 HIST1H1AQ02539 215 aaPredicted RBP17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 TGP01266 2768 aa17.03■□□□□ 0.32
SMARCD1-203ENST00000547247 CSN1S1P47710 185 aa17.02■□□□□ 0.32
SMARCD1-203ENST00000547247 NUTF2P61970 127 aaKnown RBP17.02■□□□□ 0.32
SMARCD1-203ENST00000547247 MORN3Q6PF18 240 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-203ENST00000547247 OR10J6PQ8NGY7 276 aa17.02■□□□□ 0.32
SMARCD1-203ENST00000547247 UBE2CO00762 179 aa17.02■□□□□ 0.31
SMARCD1-203ENST00000547247 RXFP4Q8TDU9 374 aa17.02■□□□□ 0.31
SMARCD1-203ENST00000547247 A0A1B0GV50 99 aa17.01■□□□□ 0.31
SMARCD1-203ENST00000547247 A0A1W2PRE2 83 aa17.01■□□□□ 0.31
SMARCD1-203ENST00000547247 TEX46H3BTG2 121 aa17.01■□□□□ 0.31
SMARCD1-203ENST00000547247 CMTM2Q8TAZ6 248 aa17.01■□□□□ 0.31
SMARCD1-203ENST00000547247 A8MTW9 85 aa17■□□□□ 0.31
SMARCD1-203ENST00000547247 ZNF705EA8MWA4 302 aaPredicted RBP17■□□□□ 0.31
SMARCD1-203ENST00000547247 TRAV1-1A0A0B4J248 108 aa16.99■□□□□ 0.31
SMARCD1-203ENST00000547247 CA1P00915 261 aaPredicted RBP16.99■□□□□ 0.31
SMARCD1-203ENST00000547247 SUMO1P63165 101 aaKnown RBP16.99■□□□□ 0.31
SMARCD1-203ENST00000547247 HBE1P02100 147 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 UBE2G2P60604 165 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 ARL6IP6Q8N6S5 226 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 TM2D3Q9BRN9 247 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 SLC25A5P05141 298 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 NHLRC4P0CG21 123 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 Q6ZWC4 215 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 NKX6-2Q9C056 277 aaPredicted RBP16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 PPP1R14DQ9NXH3 145 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 YTHDF2Q9Y5A9 579 aaKnown RBP16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 DNAH9Q9NYC9 4486 aa16.98■□□□□ 0.31
SMARCD1-203ENST00000547247 FAM74A7A6NL05 159 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 GGTLC3B5MD39 225 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 NPIPB6E9PJ23 425 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 AMTNQ6UX39 209 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 C5orf17Q8NAS9 161 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 SPATA25Q9BR10 227 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 SLC35B3Q9H1N7 401 aa16.97■□□□□ 0.31
SMARCD1-203ENST00000547247 IGKV2-40A0A087WW87 121 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 DIRC3C9JPN6 131 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 IGKV2D-40P01614 121 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 GIG44P09565 113 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 PPT1P50897 306 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 BLOC1S1P78537 153 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 TEX261Q6UWH6 196 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 C1QTNF4Q9BXJ3 329 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 ZMAT4Q9H898 229 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 RPH3ALQ9UNE2 315 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 ARL2-SNX15V9GYD0 113 aa16.96■□□□□ 0.31
SMARCD1-203ENST00000547247 FXYD7P58549 80 aa16.95■□□□□ 0.3
SMARCD1-203ENST00000547247 DEFB135Q30KP9 77 aa16.95■□□□□ 0.3
SMARCD1-203ENST00000547247 C9orf47Q6ZRZ4 202 aa16.95■□□□□ 0.3
SMARCD1-203ENST00000547247 LINC00477Q96M19 166 aa16.95■□□□□ 0.3
SMARCD1-203ENST00000547247 RBAKDNA6NC62 111 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 CCL20P78556 96 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 ERCC8Q13216 396 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 XCL2Q9UBD3 114 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 PAGE4O60829 102 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 TMEM78Q5T7P6 136 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 CST9LP1Q5W188 147 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 VGLL1Q99990 258 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 AGPAT4-IT1Q9H0P7 198 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 EPDR1Q9UM22 224 aa16.94■□□□□ 0.3
SMARCD1-203ENST00000547247 IFNA7P01567 189 aa16.93■□□□□ 0.3
SMARCD1-203ENST00000547247 GNG5P63218 68 aa16.93■□□□□ 0.3
SMARCD1-203ENST00000547247 COL7A1Q02388 2944 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms