RNA–Protein interactions for RNA: ENST00000547052.1

BRF1-209, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-209ENST00000547052 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 RAB5CP51148 216 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 IGFL4Q6B9Z1 124 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
BRF1-209ENST00000547052 SAT2Q96F10 170 aaPredicted RBP13.2□□□□□ -0.3
BRF1-209ENST00000547052 C20orf173Q96LM9 149 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 CLUHP3Q96NS8 147 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 TM2D3Q9BRN9 247 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 U3KQK5 164 aa13.2□□□□□ -0.3
BRF1-209ENST00000547052 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
BRF1-209ENST00000547052 IGKV3-20P01619 116 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 RANP62826 216 aaKnown RBP13.19□□□□□ -0.3
BRF1-209ENST00000547052 ICAM4Q14773 271 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 DEFB135Q30KP9 77 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 OR8A1Q8NGG7 326 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 RXFP4Q8TDU9 374 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
BRF1-209ENST00000547052 SPRY2O43597 315 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 GCHFRP30047 84 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 TSPOP30536 169 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 TMED6Q8WW62 240 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 Q9H3A6 140 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 OTORQ9NRC9 128 aa13.18□□□□□ -0.3
BRF1-209ENST00000547052 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 F6UB75 175 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 CNN1P51911 297 aaKnown RBP13.17□□□□□ -0.3
BRF1-209ENST00000547052 C9orf62Q8N4C0 152 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 FAM213BQ8TBF2 198 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 PHYHIPLQ96FC7 376 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
BRF1-209ENST00000547052 K7EQM0 130 aa13.16□□□□□ -0.3
BRF1-209ENST00000547052 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
BRF1-209ENST00000547052 CD300CQ08708 224 aa13.16□□□□□ -0.3
BRF1-209ENST00000547052 GDF5OSQ5U4N7 250 aa13.16□□□□□ -0.3
BRF1-209ENST00000547052 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
BRF1-209ENST00000547052 NKX6-2Q9C056 277 aaPredicted RBP13.16□□□□□ -0.3
BRF1-209ENST00000547052 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
BRF1-209ENST00000547052 NDUFB4O95168 129 aa13.15□□□□□ -0.3
BRF1-209ENST00000547052 PPT1P50897 306 aa13.15□□□□□ -0.3
BRF1-209ENST00000547052 TMEM78Q5T7P6 136 aa13.15□□□□□ -0.3
BRF1-209ENST00000547052 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.3
BRF1-209ENST00000547052 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 H2AFB1P0C5Y9 115 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 LEPP41159 167 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 SFT2D1Q8WV19 159 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 RNF183Q96D59 192 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 ZNF503Q96F45 646 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 TMEM208Q9BTX3 173 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
BRF1-209ENST00000547052 PRKDCP78527 4128 aaKnown RBP13.13□□□□□ -0.31
BRF1-209ENST00000547052 PGPA6NDG6 321 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
BRF1-209ENST00000547052 INSP01308 110 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 HBE1P02100 147 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 SLC25A5P05141 298 aaKnown RBP13.13□□□□□ -0.31
BRF1-209ENST00000547052 DEFB1P60022 68 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 RARRES2Q99969 163 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
BRF1-209ENST00000547052 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 M0R3E3 92 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 ZNF705DP0CH99 300 aaPredicted RBP13.12□□□□□ -0.31
BRF1-209ENST00000547052 ZNF705BP0CI00 300 aaPredicted RBP13.12□□□□□ -0.31
BRF1-209ENST00000547052 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
BRF1-209ENST00000547052 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 ODF3Q96PU9 254 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 RETNQ9HD89 108 aa13.12□□□□□ -0.31
BRF1-209ENST00000547052 A0A1W2PRE2 83 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 RBAKDNA6NC62 111 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 IFNA7P01567 189 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 CDKN1BP46527 198 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 NKX2-5P52952 324 aaPredicted RBP13.11□□□□□ -0.31
BRF1-209ENST00000547052 FXYD7P58549 80 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 TGP01266 2768 aa13.11□□□□□ -0.31
BRF1-209ENST00000547052 A8MTW9 85 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 F6UZH7 168 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 SULT1A2P50226 295 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 TMEM256Q8N2U0 113 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 ARL2-SNX15V9GYD0 113 aa13.1□□□□□ -0.31
BRF1-209ENST00000547052 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
BRF1-209ENST00000547052 IFNA1P01562 189 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 IGF2BP2-AS1Q96M15 143 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 TCEAL7Q9BRU2 100 aa13.09□□□□□ -0.31
BRF1-209ENST00000547052 IGHV3OR16-12A0A075B7B8 117 aa13.08□□□□□ -0.32
BRF1-209ENST00000547052 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
BRF1-209ENST00000547052 ZNF705EA8MWA4 302 aaPredicted RBP13.08□□□□□ -0.32
BRF1-209ENST00000547052 DIRC3C9JPN6 131 aa13.08□□□□□ -0.32
BRF1-209ENST00000547052 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
BRF1-209ENST00000547052 M0R2Z0 102 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms