RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MRPS16Q9Y3D3 137 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-216ENST00000545663 SMCO3A2RU48 225 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 LYRM9A8MSI8 78 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 CST7O76096 145 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 MLANAQ16655 118 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 TEPPQ6URK8 271 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 C16orf54Q6UWD8 224 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 NARS2Q96I59 477 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 KRTAP9-2Q9BYQ4 174 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 MRPL36Q9P0J6 103 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 U3KQE9 123 aa10.5□□□□□ -0.73
CLSTN3-216ENST00000545663 TRAV26-1A0A087WT03 109 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 IGSF23A1L1A6 192 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 CBY3A6NI87 242 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 TOMM40O96008 361 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 IGKV1-17P01599 117 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 RD3LP0DJH9 198 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 ZNF546Q86UE3 836 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 RNF125Q96EQ8 232 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 AQP10Q96PS8 301 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 SAV1Q9H4B6 383 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 RNF24Q9Y225 148 aa10.49□□□□□ -0.73
CLSTN3-216ENST00000545663 A0A0J9YY99 117 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 CCNKO75909 580 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 AZU1P20160 251 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 EIF2B2P49770 351 aaKnown RBP10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 VWC2Q2TAL6 325 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 BPIFCQ8NFQ6 507 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 OR51G1Q8NGK1 321 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 OR5C1Q8NGR4 320 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 GNPNAT1Q96EK6 184 aaPredicted RBP10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 LINC00052Q96N35 136 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 TMEM208Q9BTX3 173 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 NRN1Q9NPD7 142 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 HSPB11Q9Y547 144 aa10.48□□□□□ -0.73
CLSTN3-216ENST00000545663 F6UB75 175 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 ASIPP42127 132 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 PSG9Q00887 426 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 OR5I1Q13606 314 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 ZNF266Q14584 549 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 TIGITQ495A1 244 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 PXDC1Q5TGL8 231 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 TCTE3Q8IZS6 198 aa10.47□□□□□ -0.73
CLSTN3-216ENST00000545663 FXYD6-FXYD2A0A087WZ82 144 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 HMSDA8MTL9 139 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 NHLH2Q02577 135 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 ARL16Q0P5N6 197 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 FAM78BQ5VT40 261 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 ATP5SQ99766 215 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 SEPSECSQ9HD40 501 aaKnown RBP10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 SLC45A2Q9UMX9 530 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 WDR83OSQ9Y284 106 aa10.46□□□□□ -0.73
CLSTN3-216ENST00000545663 IGLV5-52A0A0A0MRZ9 124 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 TAAR5O14804 337 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 PSG1P11464 419 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 OR2F1Q13607 317 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 CYP2G1PQ6ZSU1 146 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 SCGB1C1Q8TD33 95 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 RXFP4Q8TDU9 374 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 CLUHP3Q96NS8 147 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 PARD6GQ9BYG4 376 aaPredicted RBP10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
CLSTN3-216ENST00000545663 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 IGKV1D-37A0A075B6S9 117 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 C17orf112F2Z3M2 114 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 IL4P05112 153 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 CAMLGP49069 296 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 ZNF345Q14585 488 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 Q6ZRG5 221 aa10.44□□□□□ -0.74
CLSTN3-216ENST00000545663 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 A0A0D9SG52 128 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 RPL29P47914 159 aaKnown RBP10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 ST6GAL2Q96JF0 529 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 HYLS1Q96M11 299 aa10.43□□□□□ -0.74
CLSTN3-216ENST00000545663 TNXBP22105 4242 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 AGPAT2O15120 278 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 SIVA1O15304 175 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 ARPC5O15511 151 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 HNRNPCP07910 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 M6PRP20645 277 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 HOXA5P20719 270 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 FGF7P21781 194 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 PLP1P60201 277 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 ZNF90Q03938 601 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 Q5BKY6 102 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 IGF2BP2-AS1Q96M15 143 aa10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 WDR61Q9GZS3 305 aaKnown RBP10.42□□□□□ -0.74
CLSTN3-216ENST00000545663 KRTAP9-6A0A140TA67 174 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 HYPMO75409 117 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 C1QBP02746 253 aa10.41□□□□□ -0.74
CLSTN3-216ENST00000545663 LINC00869P0C866 280 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms