RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-222	ENST00000545308	HIST1H2BA	Q96A08	127 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	ABHD14B	Q96IU4	210 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	TEX37	Q96LM6	180 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	RTL8A	Q9BWD3	113 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	MED28	Q9H204	178 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	MED31	Q9Y3C7	131 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	MRPS16	Q9Y3D3	137 aa	Known RBP	2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	LSM5	Q9Y4Y9	91 aa	Known RBP	2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	HILPDA	Q9Y5L2	63 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	FRAS1	Q86XX4	4008 aa		2.18	□□□□□ -2.06
SNHG1-222	ENST00000545308	TRAV8-1	A0A0A6YYK1	113 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	TEX50	A0A1B0GTY4	177 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	hADV38S2	A0JD32	116 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	CPSF4L	A6NMK7	179 aa	Known RBP	2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	C15orf65	H3BRN8	121 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	MRAS	O14807	208 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	RPP14	O95059	124 aa	Known RBP	2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	IFNA4	P05014	189 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	ISG15	P05161	165 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	REG1A	P05451	166 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	IDO1	P14902	403 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	CD36	P16671	472 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	CDK2	P24941	298 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	DAP	P51397	102 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	AKR1C2	P52895	323 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	TCL1A	P56279	114 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	TAS2R41	P59536	307 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	GNG11	P61952	73 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HERVK_113	P63121	156 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HIST1H3A	P68431	136 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HOXC5	Q00444	222 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	RUNX1	Q01196	453 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	FLI1	Q01543	452 aa	Predicted RBP	2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	RSU1	Q15404	277 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	BATF	Q16520	125 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	SMIM21	Q3B7S5	101 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	ACSM3	Q53FZ2	586 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HIST2H3PS2	Q5TEC6	136 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HCP5	Q6MZN7	132 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HIST2H3A	Q71DI3	136 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	NIT1	Q86X76	327 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	C4orf3	Q8WVX3	66 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	DUSP21	Q9H596	190 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	NMNAT1	Q9HAN9	279 aa	Predicted RBP	2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HRASLS	Q9HDD0	168 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	ANGPT4	Q9Y264	503 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	HSPE1-MOB4	S4R3N1	261 aa		2.17	□□□□□ -2.06
SNHG1-222	ENST00000545308	LINC00862	A6NCI5	91 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ARRDC5	A6NEK1	342 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ODF3B	A8MYP8	253 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308		H3BSH0	61 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308		M0R135	149 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	RER1	O15258	196 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	DCTN3	O75935	186 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	OR5F1	O95221	314 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	CD14	P08571	375 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	HRES1	P13985	223 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	CDKN2C	P42773	168 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	MAP2K4	P45985	399 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	OR1E2	P47887	323 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	GNG3	P63215	75 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	HES1	Q14469	280 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	RGS21	Q2M5E4	152 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	PP632	Q6XCG6	107 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ZNF826P	Q6ZT77	177 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	LYZL2	Q7Z4W2	148 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ZFAND2A	Q8N6M9	145 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	FAM216B	Q8N7L0	139 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ZNF676	Q8N7Q3	588 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	GPR32P1	Q8NGA4	272 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	OR5A2	Q8NGI9	324 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	SLC7A6	Q92536	515 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ZNF714	Q96N38	554 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	GAFA1	Q96PS6	74 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	OR52B2	Q96RD2	323 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	TLNRD1	Q9H1K6	362 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	ABCG5	Q9H222	651 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	TMEM133	Q9H2Q1	129 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	RERGL	Q9H628	205 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	TAS2R1	Q9NYW7	299 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	PYCARD	Q9ULZ3	195 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	HHLA2	Q9UM44	414 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	PCLO	Q9Y6V0	5065 aa		2.16	□□□□□ -2.06
SNHG1-222	ENST00000545308	HYDIN	Q4G0P3	5121 aa		2.15	□□□□□ -2.06
SNHG1-222	ENST00000545308	STARD9	Q9P2P6	4700 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	IGKV1D-43	A0A0B4J1Z2	117 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	RFPL4A	A6NLU0	287 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	GGTLC3	B5MD39	225 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	RFPL4AL1	F8VTS6	287 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	KPNA4	O00629	521 aa	Predicted RBP	2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	TPST1	O60507	370 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	NOS1AP	O75052	506 aa	Predicted RBP	2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	DEDD	O75618	318 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	ATP5H	O75947	161 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	NDUFB2	O95178	105 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	CD5	P06127	495 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	IFI30	P13284	250 aa		2.15	□□□□□ -2.07
SNHG1-222	ENST00000545308	GPX2	P18283	190 aa		2.15	□□□□□ -2.07

Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms