RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ATP5G3P48201 142 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 XGP55808 180 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 CYCSP99999 105 aaKnown RBP8.9□□□□□ -0.98
USP28-212ENST00000544750 NHLH2Q02577 135 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 FCN2Q15485 313 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 STX12Q86Y82 276 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 ARL6Q9H0F7 186 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 RPRMQ9NS64 109 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 CBY3A6NI87 242 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 E5RGE8 158 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 MRPS12O15235 138 aaKnown RBP8.89□□□□□ -0.99
USP28-212ENST00000544750 MPC2O95563 127 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 OR5G3P0C626 314 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 CXCL3P19876 107 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 AZU1P20160 251 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 GALR1P47211 349 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 CAMLGP49069 296 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 RAP2BP61225 183 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 PXDC1Q5TGL8 231 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 LYPD1Q8N2G4 141 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 TMEM37Q8WXS4 190 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 TMEM208Q9BTX3 173 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 RSG1Q9BU20 258 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 ARV1Q9H2C2 271 aa8.89□□□□□ -0.99
USP28-212ENST00000544750 TRAV8-2A0A0B4J237 113 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 HBG1P69891 147 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 HBG2P69892 147 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 OPCMLQ14982 345 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 SPINK13Q1W4C9 94 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 TTC32Q5I0X7 151 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 MIC13Q5XKP0 118 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 CHAC2Q8WUX2 184 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 GPR82Q96P67 336 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
USP28-212ENST00000544750 A0A087X0K7 114 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 M0R2Z0 102 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 INSP01308 110 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 RLN2P04090 185 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 RPL29P47914 159 aaKnown RBP8.87□□□□□ -0.99
USP28-212ENST00000544750 MEOX2P50222 304 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 CNN1P51911 297 aaKnown RBP8.87□□□□□ -0.99
USP28-212ENST00000544750 B2MP61769 119 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 BAXQ07812 192 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 ATP6V1FQ16864 119 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
USP28-212ENST00000544750 LINC00305Q7Z4B0 112 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 OR5C1Q8NGR4 320 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 SLC25A31Q9H0C2 315 aa8.87□□□□□ -0.99
USP28-212ENST00000544750 SRRM2Q9UQ35 2752 aaKnown RBP8.87□□□□□ -0.99
USP28-212ENST00000544750 RPL7P18124 248 aaKnown RBP8.86□□□□□ -0.99
USP28-212ENST00000544750 FGF7P21781 194 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 S100A7P31151 101 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 CLINT1Q14677 625 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 Q5VSD8 79 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 IGFL4Q6B9Z1 124 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 THAP6Q8TBB0 222 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 SLC39A9Q9NUM3 307 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 MBD2Q9UBB5 411 aa8.86□□□□□ -0.99
USP28-212ENST00000544750 COX7A2P2O60397 106 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 MPDU1O75352 247 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 RAB31Q13636 194 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 ESRGQ1W209 222 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 C10orf113Q5VZT2 155 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 RNF182Q8N6D2 247 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 HSPB11Q9Y547 144 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 PXMP4Q9Y6I8 212 aa8.85□□□□□ -0.99
USP28-212ENST00000544750 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 TRAV5A0A0B4J249 113 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
USP28-212ENST00000544750 PET100P0DJ07 73 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 LINC00612Q8N6U2 182 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 RXFP4Q8TDU9 374 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 DNAJC4Q9NNZ3 241 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 DNAH8Q96JB1 4490 aa8.84□□□□□ -0.99
USP28-212ENST00000544750 SLC17A3O00476 420 aa8.83□□□□□ -1
USP28-212ENST00000544750 SNRPCP09234 159 aaKnown RBP8.83□□□□□ -1
USP28-212ENST00000544750 IGLC2P0DOY2 106 aa8.83□□□□□ -1
USP28-212ENST00000544750 RPL12P30050 165 aaKnown RBP8.83□□□□□ -1
USP28-212ENST00000544750 TAS2R60P59551 318 aa8.83□□□□□ -1
USP28-212ENST00000544750 FGL1Q08830 312 aa8.83□□□□□ -1
USP28-212ENST00000544750 RGS21Q2M5E4 152 aa8.83□□□□□ -1
USP28-212ENST00000544750 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
USP28-212ENST00000544750 Q6ZRG5 221 aa8.83□□□□□ -1
USP28-212ENST00000544750 S100A7AQ86SG5 101 aa8.83□□□□□ -1
USP28-212ENST00000544750 OR1L4Q8NGR5 311 aa8.83□□□□□ -1
USP28-212ENST00000544750 C16orf74Q96GX8 76 aa8.83□□□□□ -1
USP28-212ENST00000544750 ATP5SQ99766 215 aa8.83□□□□□ -1
USP28-212ENST00000544750 WDR61Q9GZS3 305 aaKnown RBP8.83□□□□□ -1
USP28-212ENST00000544750 MED28Q9H204 178 aa8.83□□□□□ -1
USP28-212ENST00000544750 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
USP28-212ENST00000544750 ZNF586Q9NXT0 402 aa8.83□□□□□ -1
USP28-212ENST00000544750 MRPS16Q9Y3D3 137 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms