RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CAMPP49913 170 aa11.86□□□□□ -0.51
CHFR-223ENST00000544268 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
CHFR-223ENST00000544268 A0A1B0GXF2 115 aa11.86□□□□□ -0.51
CHFR-223ENST00000544268 TAS2R45P59539 299 aa11.86□□□□□ -0.51
CHFR-223ENST00000544268 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
CHFR-223ENST00000544268 CELSR2Q9HCU4 2923 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 A0A0G2JLM5 398 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 TRBV7-9A0A0J9YWB2 115 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 TCRBV4S1A1TA0A5B7 111 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 H0Y8G0 127 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 VSTM2AQ8TAG5 236 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 FXYD5Q96DB9 178 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 USP9YO00507 2555 aaPredicted RBP11.85□□□□□ -0.51
CHFR-223ENST00000544268 FBN2P35556 2912 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 ZNF329Q86UD4 541 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 BPESC1Q9GZL8 116 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 FBXL15Q9H469 300 aa11.85□□□□□ -0.51
CHFR-223ENST00000544268 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
CHFR-223ENST00000544268 HIGD1CA8MV81 97 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 FOXE3Q13461 319 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 LINC01545Q5VT33 79 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 OR4A5Q8NH83 315 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 DPF1Q92782 380 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 SPXQ9BT56 116 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 ONECUT1Q9UBC0 465 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 A0A1W2PRD5 423 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 A0A1W2PRF3 423 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 A0A1W2PRM7 423 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 COX6B1P14854 86 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 VMA21Q3ZAQ7 101 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 C8orf31Q8N9H6 132 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 NRGNQ92686 78 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 ASCL2Q99929 193 aa11.84□□□□□ -0.51
CHFR-223ENST00000544268 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
CHFR-223ENST00000544268 MAP1AP78559 2803 aaPredicted RBP11.83□□□□□ -0.52
CHFR-223ENST00000544268 A0A1B0GW15 77 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 PLA2G2AP14555 144 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 ZNF137PP52743 207 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 SS18L2Q9UHA2 77 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 S4R3C0 116 aa11.83□□□□□ -0.52
CHFR-223ENST00000544268 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 TMEM189A5PLL7 270 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 IGLV1-47P01700 117 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 HSD52Q0P140 79 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 OR11H12B2RN74 326 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 VWC2LB2RUY7 222 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 ZFP36P26651 326 aaKnown RBP11.82□□□□□ -0.52
CHFR-223ENST00000544268 FOXA3P55318 350 aaPredicted RBP11.82□□□□□ -0.52
CHFR-223ENST00000544268 HBBP68871 147 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 KIR3DS1Q14943 382 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 OR11H1Q8NG94 326 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 OR11H2Q8NH07 326 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 THYN1Q9P016 225 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 INSIG2Q9Y5U4 225 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 SPCS1Q9Y6A9 102 aa11.82□□□□□ -0.52
CHFR-223ENST00000544268 A0A1W2PPM0 123 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 J3QKU1 62 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 PEX7O00628 323 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 SNAI2O43623 268 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 RBP4P02753 201 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 RPL27AP46776 148 aaKnown RBP11.81□□□□□ -0.52
CHFR-223ENST00000544268 LINC00322Q6ZN03 302 aaPredicted RBP11.81□□□□□ -0.52
CHFR-223ENST00000544268 THAP8Q8NA92 274 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 MCRIP2Q9BUT9 160 aaKnown RBP11.81□□□□□ -0.52
CHFR-223ENST00000544268 C19orf24Q9BVV8 132 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 MRPL32Q9BYC8 188 aaKnown RBP11.81□□□□□ -0.52
CHFR-223ENST00000544268 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 BUB1B-PAK6H3BSN5 160 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 K7EQM0 130 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 COL8A1P27658 744 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 MRAP2Q96G30 205 aa11.81□□□□□ -0.52
CHFR-223ENST00000544268 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 CRYGBP07316 175 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 FGF6P10767 208 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 KLRD1Q13241 179 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 RABAC1Q9UI14 185 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 PTPN13Q12923 2485 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 SUB1P53999 127 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHFR-223ENST00000544268 ATP5IP56385 69 aaPredicted RBP11.8□□□□□ -0.52
CHFR-223ENST00000544268 LMO4P61968 165 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
CHFR-223ENST00000544268 NAA38Q9BRA0 125 aaKnown RBP11.8□□□□□ -0.52
CHFR-223ENST00000544268 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 POLQO75417 2590 aa11.8□□□□□ -0.52
CHFR-223ENST00000544268 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
CHFR-223ENST00000544268 PGPA6NDG6 321 aa11.79□□□□□ -0.52
CHFR-223ENST00000544268 ATP5J2P56134 94 aa11.79□□□□□ -0.52
CHFR-223ENST00000544268 CD300EQ496F6 205 aaPredicted RBP11.79□□□□□ -0.52
CHFR-223ENST00000544268 KLF17Q5JT82 389 aaPredicted RBP11.79□□□□□ -0.52
CHFR-223ENST00000544268 PERPQ96FX8 193 aa11.79□□□□□ -0.52
CHFR-223ENST00000544268 NDFIP1Q9BT67 221 aa11.79□□□□□ -0.52
CHFR-223ENST00000544268 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms