RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 RNF141Q8WVD5 230 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 RPUSD4Q96CM3 377 aaKnown RBP7.22□□□□□ -1.25
VEGFB-204ENST00000543462 CSMD3Q7Z407 3707 aa7.22□□□□□ -1.25
VEGFB-204ENST00000543462 KANTRA0A1W2PQU2 76 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF705FA8MVS1 300 aaPredicted RBP7.21□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF705EA8MWA4 302 aaPredicted RBP7.21□□□□□ -1.26
VEGFB-204ENST00000543462 NPIPB6E9PJ23 425 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 M0R3E3 92 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 CRXO43186 299 aaPredicted RBP7.21□□□□□ -1.26
VEGFB-204ENST00000543462 OR7C2O60412 319 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 CA1P00915 261 aaPredicted RBP7.21□□□□□ -1.26
VEGFB-204ENST00000543462 SEC11BP0C7V7 166 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 ARL14EPLP0DKL9 152 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 TAS2R45P59539 299 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 UBE2L3P68036 154 aaKnown RBP7.21□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF738Q8NE65 137 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 ZMAT4Q9H898 229 aa7.21□□□□□ -1.26
VEGFB-204ENST00000543462 CTXND1A0A1B0GTU2 59 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 SPRY2O43597 315 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 DUSP14O95147 198 aaKnown RBP7.2□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF705DP0CH99 300 aaPredicted RBP7.2□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF705BP0CI00 300 aaPredicted RBP7.2□□□□□ -1.26
VEGFB-204ENST00000543462 PSG9Q00887 426 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 EBLN2Q6P2I7 272 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF705AQ6ZN79 300 aaPredicted RBP7.2□□□□□ -1.26
VEGFB-204ENST00000543462 BAP18Q8IXM2 172 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 ZNF471Q9BX82 626 aaPredicted RBP7.2□□□□□ -1.26
VEGFB-204ENST00000543462 SLC35B3Q9H1N7 401 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 X6R8D5 127 aa7.2□□□□□ -1.26
VEGFB-204ENST00000543462 A0A1W2PPV4 95 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 HMGB3O15347 200 aaKnown RBP7.19□□□□□ -1.26
VEGFB-204ENST00000543462 PRB4P10163 310 aaPredicted RBP7.19□□□□□ -1.26
VEGFB-204ENST00000543462 GCHFRP30047 84 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 NDUFA5Q16718 116 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 Q8NAQ8 132 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 BLNKQ8WV28 456 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 ACTR3CQ9C0K3 210 aaPredicted RBP7.19□□□□□ -1.26
VEGFB-204ENST00000543462 Q9H3A6 140 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
VEGFB-204ENST00000543462 UMAD1C9J7I0 102 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 RBMY1A1P0DJD3 496 aaKnown RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 RBMY1CP0DJD4 496 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 TPT1P13693 172 aaKnown RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 FHITP49789 147 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 HIST1H1AQ02539 215 aaPredicted RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 ICAM4Q14773 271 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 RBMY1FQ15415 496 aaKnown RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 C9orf47Q6ZRZ4 202 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 C1orf158Q8N1D5 194 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 ARL6IP6Q8N6S5 226 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 OR4B1Q8NGF8 309 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 LRRC20Q8TCA0 184 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 TMED6Q8WW62 240 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 C1QTNF4Q9BXJ3 329 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 C11orf68Q9H3H3 251 aaKnown RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 OTORQ9NRC9 128 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 XCL2Q9UBD3 114 aa7.18□□□□□ -1.26
VEGFB-204ENST00000543462 DYNC2H1Q8NCM8 4307 aaKnown RBP7.18□□□□□ -1.26
VEGFB-204ENST00000543462 MAP1LC3B2A6NCE7 125 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 GGTLC3B5MD39 225 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 M0R2Z0 102 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 CXorf1O96002 111 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 IGKV3-20P01619 116 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 CT45A10P0DMU9 189 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 EIF5AP63241 154 aaKnown RBP7.17□□□□□ -1.26
VEGFB-204ENST00000543462 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 DPPA3Q6W0C5 159 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 SLC51BQ86UW2 128 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 MBD3L1Q8WWY6 194 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 IGF2BP2-AS1Q96M15 143 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 WWC2-AS2Q96NR7 200 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 NEU1Q99519 415 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 MAP1LC3BQ9GZQ8 125 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 AAMDCQ9H7C9 122 aa7.17□□□□□ -1.26
VEGFB-204ENST00000543462 IGKV2-40A0A087WW87 121 aaPredicted RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 KLLNB2CW77 178 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 IGKV2D-40P01614 121 aaPredicted RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 AMBPP02760 352 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 SLC25A5P05141 298 aaKnown RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 CRISP2P16562 243 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 NKX2-5P52952 324 aaPredicted RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 FXYD7P58549 80 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 NUTF2P61970 127 aaKnown RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 RANP62826 216 aaKnown RBP7.16□□□□□ -1.26
VEGFB-204ENST00000543462 KIR3DS1Q14943 382 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 OR11H2Q8NH07 326 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 VGLL1Q99990 258 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 AGPAT4-IT1Q9H0P7 198 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 TMEM167BQ9NRX6 74 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 PPP1R14DQ9NXH3 145 aa7.16□□□□□ -1.26
VEGFB-204ENST00000543462 TRAV1-1A0A0B4J248 108 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms