RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 WISP2O76076 250 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 C11orf53Q8IXP5 236 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 TRBV7-9A0A0J9YWB2 115 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 C6orf226Q5I0X4 101 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 LY6G6FQ5SQ64 297 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 S100A7L2Q5SY68 101 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 C1orf159Q96HA4 380 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 SDHCQ99643 169 aaPredicted RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 JPT2Q9H910 190 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 MYO9AB2RTY4 2548 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 TP53BP1Q12888 1972 aaPredicted RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 IGKV2-40A0A087WW87 121 aaPredicted RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 GAGE12JA6NER3 117 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 IGKV2D-40P01614 121 aaPredicted RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 IGLV3-1P01715 115 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 PPIFP30405 207 aaKnown RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 CCL20P78556 96 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 GAGE1Q13065 139 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 GAGE4Q13068 117 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 GAGE5Q13069 117 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 GAGE13Q4V321 117 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
POLR1B-217ENST00000541869 MRPL23Q16540 153 aaKnown RBP8.19□□□□□ -1.1
POLR1B-217ENST00000541869 TRAV5A0A0B4J249 113 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 IGKV1-6A0A0C4DH72 117 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 A0A1B0GW64 132 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 IFITM10A6NMD0 228 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 CFPP27918 469 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 ZNF493Q6ZR52 646 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 SPXQ9BT56 116 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 SMPXQ9UHP9 88 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 MBD6Q96DN6 1003 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 PRR25Q96S07 402 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 Q9HAA7 133 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 CEP295Q9C0D2 2601 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 UBE2CO00762 179 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 BCL6BQ8N143 479 aaPredicted RBP8.18□□□□□ -1.1
POLR1B-217ENST00000541869 C1orf43Q9BWL3 253 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 MRPL18Q9H0U6 180 aaKnown RBP8.18□□□□□ -1.1
POLR1B-217ENST00000541869 CST9LQ9H4G1 147 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 MTORP42345 2549 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 A8MWV9 139 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 PHOX2AO14813 284 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 SSBP2P81877 361 aaPredicted RBP8.18□□□□□ -1.1
POLR1B-217ENST00000541869 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 C4orf3Q8WVX3 66 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 ICOSQ9Y6W8 199 aa8.18□□□□□ -1.1
POLR1B-217ENST00000541869 IGKV1OR2-108A0A075B7D4 117 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 PDE6HQ13956 83 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 GCSAMLQ5JQS6 135 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.17□□□□□ -1.1
POLR1B-217ENST00000541869 NMBP08949 121 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 ORMDL3Q8N138 153 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 C11orf45Q8TAV5 145 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 FLNBO75369 2602 aaKnown RBP8.17□□□□□ -1.1
POLR1B-217ENST00000541869 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 C7orf71A4D174 169 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 PPBPP02775 128 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 Q6ZWC4 215 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 LEPROTL1O95214 131 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 DEFB135Q30KP9 77 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
POLR1B-217ENST00000541869 RNF126Q9BV68 326 aa8.17□□□□□ -1.1
POLR1B-217ENST00000541869 A0A0J9YY99 117 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 H7C2G1 150 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 Q5BKY6 102 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 OR10D4PQ8NGN7 298 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 MGST2Q99735 147 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 EPG5Q9HCE0 2579 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.16□□□□□ -1.1
POLR1B-217ENST00000541869 EXOC3-AS1Q8N2X6 119 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 OBSL1O75147 1896 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 STAG3L2P0CL84 134 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 STAG3L3P0CL85 134 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 UBE2BP63146 152 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 RSPO3Q9BXY4 272 aaPredicted RBP8.16□□□□□ -1.1
POLR1B-217ENST00000541869 C2CD3Q4AC94 2353 aa8.16□□□□□ -1.1
POLR1B-217ENST00000541869 C15orf62A8K5M9 175 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.15□□□□□ -1.1
POLR1B-217ENST00000541869 ERASQ7Z444 233 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 EP400Q96L91 3159 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 M0R143 59 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 LINC00158P58513 81 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 LMO4P61968 165 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 CD300CQ08708 224 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 GUSBP1Q15486 140 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 RHOHQ15669 191 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 KRTAP27-1Q3LI81 207 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 ORMDL2Q53FV1 153 aa8.15□□□□□ -1.1
POLR1B-217ENST00000541869 SPRNQ5BIV9 151 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms