RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 PYGO2Q9BRQ0 406 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 FUNDC2Q9BWH2 189 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 MIXL1Q9H2W2 232 aa7.89□□□□□ -1.15
COPA-205ENST00000541366 MRPL16Q9NX20 251 aaKnown RBP7.89□□□□□ -1.15
COPA-205ENST00000541366 LRP2P98164 4655 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 E5RGE8 158 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 PSCAO43653 123 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 SPINK4O60575 86 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 CRYGDP07320 174 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 AKAIN1P0CW23 69 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 PLP1P60201 277 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 FHL2Q14192 279 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 MRPL23Q16540 153 aaKnown RBP7.88□□□□□ -1.15
COPA-205ENST00000541366 LCN15Q6UWW0 184 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 Q6ZQT7 251 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 NEGR1Q7Z3B1 354 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 Q8N814 137 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 ARL6Q9H0F7 186 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 PRO0255Q9UI72 69 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 TP53TG3Q9ULZ0 132 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
COPA-205ENST00000541366 SYNGR2O43760 224 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 CCNKO75909 580 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 LEPP41159 167 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
COPA-205ENST00000541366 CD300CQ08708 224 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 BTN1A1Q13410 526 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 MORN5Q5VZ52 161 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 PRRT1Q99946 306 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 ARV1Q9H2C2 271 aa7.87□□□□□ -1.15
COPA-205ENST00000541366 H3BQ15 152 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 K7EQD1 137 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 CXCL2P19875 107 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 TCL1AP56279 114 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 RRAS2P62070 204 aaPredicted RBP7.86□□□□□ -1.15
COPA-205ENST00000541366 SSBP1Q04837 148 aaKnown RBP7.86□□□□□ -1.15
COPA-205ENST00000541366 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 ERCC8Q13216 396 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 WFDC2Q14508 124 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 Q6ZSA8 131 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 EIF4E3Q8N5X7 224 aaKnown RBP7.86□□□□□ -1.15
COPA-205ENST00000541366 ZNF680Q8NEM1 530 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 SMIM4Q8WVI0 70 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 CIB3Q96Q77 187 aaPredicted RBP7.86□□□□□ -1.15
COPA-205ENST00000541366 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 NAA50Q9GZZ1 169 aaKnown RBP7.86□□□□□ -1.15
COPA-205ENST00000541366 Q9HAA7 133 aa7.86□□□□□ -1.15
COPA-205ENST00000541366 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 C7orf71A4D174 169 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 MED6O75586 246 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 SFTA3P0C7M3 94 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 ANXA3P12429 323 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 RPP30P78346 268 aaKnown RBP7.85□□□□□ -1.15
COPA-205ENST00000541366 SRPXP78539 464 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 SLC38A11Q08AI6 406 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 LINC01620Q4KN68 170 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 LINC00305Q7Z4B0 112 aa7.85□□□□□ -1.15
COPA-205ENST00000541366 SAT2Q96F10 170 aaPredicted RBP7.85□□□□□ -1.15
COPA-205ENST00000541366 RCL1Q9Y2P8 373 aaKnown RBP7.85□□□□□ -1.15
COPA-205ENST00000541366 STRAPQ9Y3F4 350 aaKnown RBP7.85□□□□□ -1.15
COPA-205ENST00000541366 CTDSP2O14595 271 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 ATP6V1G2O95670 118 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 OXTP01178 125 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 C1QBP02746 253 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 SLC25A5P05141 298 aaKnown RBP7.84□□□□□ -1.15
COPA-205ENST00000541366 GYPEP15421 78 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 SRIP30626 198 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 RNASE4P34096 147 aaKnown RBP7.84□□□□□ -1.15
COPA-205ENST00000541366 SELENOTP62341 195 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 ANXA2RQ3ZCQ2 193 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 C15orf40Q8WUR7 153 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 ODF3Q96PU9 254 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 VGLL1Q99990 258 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 MRPL32Q9BYC8 188 aaKnown RBP7.84□□□□□ -1.15
COPA-205ENST00000541366 MCUBQ9NWR8 336 aa7.84□□□□□ -1.15
COPA-205ENST00000541366 ANKRD20A5PA0PJZ0 165 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 K7EP13 123 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 M0R3E3 92 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 RGS5O15539 181 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 HOXB5P09067 269 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 SLC25A6P12236 298 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 SLAQ13239 276 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 OPCMLQ14982 345 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 PRR9Q5T870 116 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 SCXQ7RTU7 201 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 AP3S1Q92572 193 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 ZNF479Q96JC4 524 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 VCX3AQ9NNX9 186 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 SCP2D1Q9UJQ7 156 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 RABL2BQ9UNT1 228 aa7.83□□□□□ -1.16
COPA-205ENST00000541366 A0A087WXM4 84 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 TRAV5A0A0B4J249 113 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 TRGV4A0A0C4DH28 118 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 LOC100131303A0A0U1RQF7 123 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 DUXBA0A1W2PPF3 345 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 KLLNB2CW77 178 aa7.82□□□□□ -1.16
COPA-205ENST00000541366 LECT2O14960 151 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms